HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:34.9 nTPM
HPA Brain:35.5 nTPM
GTEx:34.9 nTPM
FANTOM5:29.3 Scaled Tags Per Million
Pig:21.8 nTPM
Mouse:29.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021007
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.5
Sample id Sample description nTPM
Hippocampus
nTPM: 25.8
1898 Male, age 80, left hemisphere 31.7
2621 Female, age 67, right hemisphere 28.0
2529 Female, age 94, left hemisphere 27.4
1855 Male, age 76, left hemisphere 26.2
2148 Female, age 91, left hemisphere 20.9
1911 Female, age 85, right hemisphere 20.5
Dentate gyrus
nTPM: 26.1
2010 Male, age 76, both hemispheres 28.5
2530 Female, age 94, left hemisphere 28.4
1927 Female, age 91, both hemispheres 26.9
2246 Female, age 85, both hemispheres 26.9
2528 Male, age 74, both hemispheres 23.5
2531 Female, age 67, both hemispheres 22.5
Entorhinal gyrus
nTPM: 29.4
2764 Male, age 80, right hemisphere 39.3
1787 Male, age 76, left hemisphere 33.0
1938 Female, age 85, left hemisphere 31.6
2613 Female, age 94, left hemisphere 26.0
2117 Female, age 91, right hemisphere 24.4
2686 Male, age 75, right hemisphere 22.0
Hippocampus, CA1
nTPM: 28.8
2749 Male, age 80, left hemisphere 41.6
2527 Male, age 74, both hemispheres 30.0
1873 Female, age 85, both hemispheres 25.9
2082 Female, age 91, right hemisphere 23.4
2045 Male, age 76, both hemispheres 23.2
Hippocampus, CA2
nTPM: 26.1
1892 Male, age 76, both hemispheres 30.2
2249 Male, age 74, both hemispheres 29.5
1963 Male, age 80, left hemisphere 27.3
2437 Female, age 94, left hemisphere 25.8
1940 Female, age 85, left hemisphere 21.9
2113 Female, age 91, right hemisphere 21.8
Hippocampus, CA3
nTPM: 26.4
2436 Male, age 74, both hemispheres 28.9
1867 Male, age 76, both hemispheres 28.6
2620 Female, age 94, left hemisphere 28.2
2137 Male, age 80, left hemisphere 27.2
1891 Female, age 85, both hemispheres 23.2
2861 Female, age 67, both hemispheres 22.4
Parahippocampal cortex
nTPM: 29.5
1850 Male, age 80, both hemispheres 37.4
2532 Female, age 72, left hemisphere 31.5
1990 Female, age 91, right hemisphere 31.3
1933 Female, age 85, both hemispheres 30.8
2245 Female, age 91, both hemispheres 30.4
2250 Female, age 67, right hemisphere 30.0
2018 Male, age 76, both hemispheres 26.9
2622 Female, age 67, right hemisphere 25.9
2693 Female, age 94, both hemispheres 25.8
2692 Male, age 74, both hemispheres 25.1
Perirhinal gyrus
nTPM: 35.5
1847 Female, age 91, left hemisphere 40.3
1794 Male, age 80, right hemisphere 40.1
1841 Female, age 85, right hemisphere 37.6
2848 Male, age 76, right hemisphere 30.0
2521 Female, age 94, right hemisphere 29.3
Subiculum
nTPM: 26.4
1977 Female, age 85, both hemispheres 30.7
2619 Male, age 74, both hemispheres 29.9
2438 Female, age 94, left hemisphere 28.4
1901 Male, age 80, both hemispheres 26.1
2042 Male, age 76, both hemispheres 24.6
2729 Female, age 91, right hemisphere 18.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 89.6
Min nTPM: 10.2
Std nTPM: 11.6
Median nTPM: 32.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 89.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 68.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 65.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 63.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 63.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 63.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 60.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 60.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 59.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 59.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 56.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.3
FF:10169-103B7 60 years, female 35.3
FF:10153-102I9 76 years, female 23.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.8
Pig sample Sample description nTPM
Subiculum
nTPM: 19.7
Samples: 4

Max nTPM: 23.8
Min nTPM: 17.2
Sample A Female 23.8
Sample B Female 19.6
Sample C Male 18.2
Sample D Male 17.2
Dorsal hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 26.0
Min nTPM: 19.5
Sample A Female 26.0
Sample B Female 21.7
Sample C Male 19.5
Sample D Male 20.1
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 21.2
Min nTPM: 18.5
Sample A Female 20.7
Sample B Female 21.2
Sample C Male 19.2
Sample D Male 18.5
Ventral hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 23.8
Min nTPM: 18.6
Sample A Female 23.5
Sample B Female 18.6
Sample C Male 23.8
Sample D Male 21.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 30.3
Min nTPM: 25.2
Sample A Male 25.2
Sample B Male 28.3
Sample C Female 25.5
Sample D Female 30.3
Hippocampal formation
nTPM: 29.7
Samples: 4

Max nTPM: 32.2
Min nTPM: 27.5
Sample A Male 31.4
Sample B Male 27.8
Sample C Female 27.5
Sample D Female 32.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
686220 Antisense, RP_040916_01_C06, Mouse strain C57BL/6J (56 days, male) 0.1

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