HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:28.2 nTPM
HPA Brain:64.6 nTPM
GTEx:28.2 nTPM
FANTOM5:31.1 Scaled Tags Per Million
Pig:42.6 nTPM
Mouse:79.2 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003073
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.6
Sample id Sample description nTPM
Hippocampus
nTPM: 59.0
2621 Female, age 67, right hemisphere 76.7
1855 Male, age 76, left hemisphere 66.2
2529 Female, age 94, left hemisphere 65.1
2148 Female, age 91, left hemisphere 61.8
1898 Male, age 80, left hemisphere 44.9
1911 Female, age 85, right hemisphere 39.1
Dentate gyrus
nTPM: 53.7
2531 Female, age 67, both hemispheres 66.2
2010 Male, age 76, both hemispheres 65.6
1927 Female, age 91, both hemispheres 55.7
2530 Female, age 94, left hemisphere 53.9
2528 Male, age 74, both hemispheres 42.5
2246 Female, age 85, both hemispheres 38.6
Entorhinal gyrus
nTPM: 32.2
2686 Male, age 75, right hemisphere 42.3
2117 Female, age 91, right hemisphere 35.0
2613 Female, age 94, left hemisphere 31.0
1787 Male, age 76, left hemisphere 30.8
2764 Male, age 80, right hemisphere 27.4
1938 Female, age 85, left hemisphere 26.6
Hippocampus, CA1
nTPM: 64.6
2045 Male, age 76, both hemispheres 82.5
2527 Male, age 74, both hemispheres 75.2
2749 Male, age 80, left hemisphere 72.6
1873 Female, age 85, both hemispheres 51.5
2082 Female, age 91, right hemisphere 41.5
Hippocampus, CA2
nTPM: 49.4
1963 Male, age 80, left hemisphere 75.9
1892 Male, age 76, both hemispheres 57.0
2437 Female, age 94, left hemisphere 50.6
2113 Female, age 91, right hemisphere 46.6
2249 Male, age 74, both hemispheres 45.4
1940 Female, age 85, left hemisphere 20.6
Hippocampus, CA3
nTPM: 59.0
2861 Female, age 67, both hemispheres 101.0
1867 Male, age 76, both hemispheres 66.8
2620 Female, age 94, left hemisphere 66.6
2137 Male, age 80, left hemisphere 45.9
2436 Male, age 74, both hemispheres 40.4
1891 Female, age 85, both hemispheres 33.1
Parahippocampal cortex
nTPM: 31.6
2018 Male, age 76, both hemispheres 48.4
2250 Female, age 67, right hemisphere 44.2
2245 Female, age 91, both hemispheres 36.8
2693 Female, age 94, both hemispheres 32.7
1990 Female, age 91, right hemisphere 31.8
2692 Male, age 74, both hemispheres 29.8
2622 Female, age 67, right hemisphere 28.9
1933 Female, age 85, both hemispheres 27.4
2532 Female, age 72, left hemisphere 18.5
1850 Male, age 80, both hemispheres 17.4
Perirhinal gyrus
nTPM: 26.7
1847 Female, age 91, left hemisphere 39.0
2521 Female, age 94, right hemisphere 34.0
2848 Male, age 76, right hemisphere 23.6
1794 Male, age 80, right hemisphere 20.2
1841 Female, age 85, right hemisphere 16.6
Subiculum
nTPM: 38.0
2729 Female, age 91, right hemisphere 47.9
2438 Female, age 94, left hemisphere 46.8
2042 Male, age 76, both hemispheres 39.6
2619 Male, age 74, both hemispheres 37.6
1901 Male, age 80, both hemispheres 29.3
1977 Female, age 85, both hemispheres 26.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 72.7
Min nTPM: 4.3
Std nTPM: 13.9
Median nTPM: 27.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 72.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 66.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 63.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 62.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 62.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 60.5
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 60.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 60.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 57.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 53.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 53.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.1
FF:10169-103B7 60 years, female 37.3
FF:10153-102I9 76 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.6
Pig sample Sample description nTPM
Subiculum
nTPM: 42.6
Samples: 4

Max nTPM: 58.7
Min nTPM: 29.5
Sample A Female 58.7
Sample B Female 43.1
Sample C Male 39.1
Sample D Male 29.5
Dorsal hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 33.5
Min nTPM: 26.6
Sample A Female 32.0
Sample B Female 33.5
Sample C Male 26.6
Sample D Male 27.3
Entorhinal cortex
nTPM: 39.0
Samples: 4

Max nTPM: 43.6
Min nTPM: 33.1
Sample A Female 38.2
Sample B Female 41.0
Sample C Male 43.6
Sample D Male 33.1
Ventral hippocampus
nTPM: 40.0
Samples: 4

Max nTPM: 56.1
Min nTPM: 28.2
Sample A Female 36.0
Sample B Female 39.6
Sample C Male 56.1
Sample D Male 28.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.1
Samples: 4

Max nTPM: 78.9
Min nTPM: 67.7
Sample A Male 77.2
Sample B Male 67.7
Sample C Female 78.9
Sample D Female 68.7
Hippocampal formation
nTPM: 79.2
Samples: 4

Max nTPM: 83.1
Min nTPM: 76.2
Sample A Male 80.7
Sample B Male 76.2
Sample C Female 76.7
Sample D Female 83.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
70634234 Antisense, RP_050725_01_E08, Mouse strain C57BL/6J (56 days, male) 9.7
638710 Antisense, RP_040831_02_C08, Mouse strain C57BL/6J (56 days, male) 5.3
77910723 Antisense, RP_070208_04_F07, Mouse strain C57BL/6J (56 days, male) 3.8
77887884 Antisense, RP_070208_04_F07, Mouse strain C57BL/6J (56 days, male) 2.9

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