HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.5 nTPM
HPA Brain:55.9 nTPM
GTEx:5.5 nTPM
FANTOM5:85.8 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:4.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.9
Sample id Sample description nTPM
Hippocampus
nTPM: 54.8
2148 Female, age 91, left hemisphere 63.1
2529 Female, age 94, left hemisphere 60.8
2621 Female, age 67, right hemisphere 55.4
1911 Female, age 85, right hemisphere 53.8
1855 Male, age 76, left hemisphere 52.4
1898 Male, age 80, left hemisphere 43.3
Dentate gyrus
nTPM: 52.7
2531 Female, age 67, both hemispheres 60.4
2530 Female, age 94, left hemisphere 56.7
2246 Female, age 85, both hemispheres 51.5
2010 Male, age 76, both hemispheres 50.8
1927 Female, age 91, both hemispheres 50.3
2528 Male, age 74, both hemispheres 46.3
Entorhinal gyrus
nTPM: 40.5
2686 Male, age 75, right hemisphere 48.2
2117 Female, age 91, right hemisphere 45.8
1787 Male, age 76, left hemisphere 45.4
1938 Female, age 85, left hemisphere 37.9
2764 Male, age 80, right hemisphere 34.3
2613 Female, age 94, left hemisphere 31.2
Hippocampus, CA1
nTPM: 50.4
2045 Male, age 76, both hemispheres 63.6
1873 Female, age 85, both hemispheres 52.2
2527 Male, age 74, both hemispheres 50.1
2082 Female, age 91, right hemisphere 47.3
2749 Male, age 80, left hemisphere 38.7
Hippocampus, CA2
nTPM: 46.1
2113 Female, age 91, right hemisphere 50.5
2437 Female, age 94, left hemisphere 48.7
1963 Male, age 80, left hemisphere 45.9
1940 Female, age 85, left hemisphere 44.5
2249 Male, age 74, both hemispheres 44.2
1892 Male, age 76, both hemispheres 42.9
Hippocampus, CA3
nTPM: 55.9
2436 Male, age 74, both hemispheres 68.4
2861 Female, age 67, both hemispheres 67.3
2620 Female, age 94, left hemisphere 57.8
1867 Male, age 76, both hemispheres 55.2
1891 Female, age 85, both hemispheres 50.4
2137 Male, age 80, left hemisphere 36.5
Parahippocampal cortex
nTPM: 46.3
2018 Male, age 76, both hemispheres 64.7
2622 Female, age 67, right hemisphere 54.8
2692 Male, age 74, both hemispheres 53.4
2532 Female, age 72, left hemisphere 50.6
2245 Female, age 91, both hemispheres 49.4
1990 Female, age 91, right hemisphere 40.8
2250 Female, age 67, right hemisphere 39.9
1850 Male, age 80, both hemispheres 37.9
2693 Female, age 94, both hemispheres 36.1
1933 Female, age 85, both hemispheres 35.4
Perirhinal gyrus
nTPM: 38.2
1841 Female, age 85, right hemisphere 42.5
2521 Female, age 94, right hemisphere 39.1
2848 Male, age 76, right hemisphere 38.3
1794 Male, age 80, right hemisphere 38.0
1847 Female, age 91, left hemisphere 33.0
Subiculum
nTPM: 49.1
2438 Female, age 94, left hemisphere 59.3
2042 Male, age 76, both hemispheres 56.9
2729 Female, age 91, right hemisphere 51.2
2619 Male, age 74, both hemispheres 50.8
1901 Male, age 80, both hemispheres 39.6
1977 Female, age 85, both hemispheres 36.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.5
Samples: 197

Max nTPM: 16.7
Min nTPM: 2.2
Std nTPM: 1.8
Median nTPM: 5.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 16.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 13.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 12.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 12.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 9.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 9.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 9.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 8.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 8.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 8.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 8.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.8
FF:10153-102I9 76 years, female 95.9
FF:10169-103B7 60 years, female 75.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.2
Pig sample Sample description nTPM
Subiculum
nTPM: 16.4
Samples: 4

Max nTPM: 17.4
Min nTPM: 15.3
Sample A Female 17.4
Sample B Female 16.2
Sample C Male 16.5
Sample D Male 15.3
Dorsal hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 25.7
Min nTPM: 16.7
Sample A Female 24.0
Sample B Female 25.7
Sample C Male 16.7
Sample D Male 20.2
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 18.5
Min nTPM: 13.5
Sample A Female 18.5
Sample B Female 15.6
Sample C Male 16.1
Sample D Male 13.5
Ventral hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 24.7
Min nTPM: 19.7
Sample A Female 20.6
Sample B Female 19.7
Sample C Male 23.8
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 4.7
Min nTPM: 2.9
Sample A Male 3.5
Sample B Male 2.9
Sample C Female 4.7
Sample D Female 4.1
Hippocampal formation
nTPM: 4.4
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.5
Sample A Male 3.5
Sample B Male 4.6
Sample C Female 5.3
Sample D Female 4.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
73870509 Antisense, RP_051212_04_B08, Mouse strain C57BL/6J (56 days, male) 0.3
71763480 Antisense, RP_050921_02_A08, Mouse strain C57BL/6J (56 days, male) 0.0

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