HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:52.7 nTPM
HPA Brain:48.5 nTPM
GTEx:52.7 nTPM
FANTOM5:43.1 Scaled Tags Per Million
Pig:30.6 nTPM
Mouse:45.2 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011729
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.5
Sample id Sample description nTPM
Hippocampus
nTPM: 35.9
1898 Male, age 80, left hemisphere 48.5
2621 Female, age 67, right hemisphere 36.2
1855 Male, age 76, left hemisphere 35.5
2529 Female, age 94, left hemisphere 33.3
2148 Female, age 91, left hemisphere 32.6
1911 Female, age 85, right hemisphere 29.5
Dentate gyrus
nTPM: 36.9
2530 Female, age 94, left hemisphere 47.7
1927 Female, age 91, both hemispheres 42.8
2010 Male, age 76, both hemispheres 37.6
2528 Male, age 74, both hemispheres 33.9
2246 Female, age 85, both hemispheres 30.6
2531 Female, age 67, both hemispheres 28.6
Entorhinal gyrus
nTPM: 40.7
2764 Male, age 80, right hemisphere 50.9
2613 Female, age 94, left hemisphere 45.6
1938 Female, age 85, left hemisphere 43.9
1787 Male, age 76, left hemisphere 38.2
2117 Female, age 91, right hemisphere 35.4
2686 Male, age 75, right hemisphere 30.2
Hippocampus, CA1
nTPM: 40.5
2749 Male, age 80, left hemisphere 69.5
2527 Male, age 74, both hemispheres 39.0
1873 Female, age 85, both hemispheres 36.2
2082 Female, age 91, right hemisphere 31.2
2045 Male, age 76, both hemispheres 26.5
Hippocampus, CA2
nTPM: 40.7
1892 Male, age 76, both hemispheres 50.0
1963 Male, age 80, left hemisphere 49.2
2437 Female, age 94, left hemisphere 44.5
2249 Male, age 74, both hemispheres 39.3
1940 Female, age 85, left hemisphere 31.1
2113 Female, age 91, right hemisphere 30.3
Hippocampus, CA3
nTPM: 37.2
2137 Male, age 80, left hemisphere 49.1
1867 Male, age 76, both hemispheres 42.9
2436 Male, age 74, both hemispheres 41.2
1891 Female, age 85, both hemispheres 31.6
2861 Female, age 67, both hemispheres 30.3
2620 Female, age 94, left hemisphere 28.3
Parahippocampal cortex
nTPM: 39.3
1850 Male, age 80, both hemispheres 48.0
2245 Female, age 91, both hemispheres 42.4
1990 Female, age 91, right hemisphere 42.2
1933 Female, age 85, both hemispheres 41.6
2250 Female, age 67, right hemisphere 41.1
2692 Male, age 74, both hemispheres 38.2
2532 Female, age 72, left hemisphere 37.8
2693 Female, age 94, both hemispheres 36.6
2622 Female, age 67, right hemisphere 33.2
2018 Male, age 76, both hemispheres 32.3
Perirhinal gyrus
nTPM: 48.5
1847 Female, age 91, left hemisphere 63.4
1794 Male, age 80, right hemisphere 49.3
1841 Female, age 85, right hemisphere 48.3
2521 Female, age 94, right hemisphere 45.1
2848 Male, age 76, right hemisphere 36.4
Subiculum
nTPM: 36.8
1977 Female, age 85, both hemispheres 43.1
2438 Female, age 94, left hemisphere 41.4
1901 Male, age 80, both hemispheres 39.3
2619 Male, age 74, both hemispheres 39.2
2042 Male, age 76, both hemispheres 29.6
2729 Female, age 91, right hemisphere 28.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.7
Samples: 197

Max nTPM: 102.5
Min nTPM: 23.6
Std nTPM: 14.5
Median nTPM: 50.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 102.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 94.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 91.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 91.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 90.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 86.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 82.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 82.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 78.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 78.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 77.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.1
FF:10169-103B7 60 years, female 56.0
FF:10153-102I9 76 years, female 30.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.6
Pig sample Sample description nTPM
Subiculum
nTPM: 27.0
Samples: 4

Max nTPM: 32.0
Min nTPM: 23.6
Sample A Female 32.0
Sample B Female 26.0
Sample C Male 26.4
Sample D Male 23.6
Dorsal hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 35.5
Min nTPM: 23.5
Sample A Female 35.5
Sample B Female 29.3
Sample C Male 34.0
Sample D Male 23.5
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 33.3
Min nTPM: 23.8
Sample A Female 30.5
Sample B Female 33.3
Sample C Male 29.3
Sample D Male 23.8
Ventral hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 40.0
Min nTPM: 22.0
Sample A Female 29.3
Sample B Female 22.0
Sample C Male 40.0
Sample D Male 30.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.3
Samples: 4

Max nTPM: 45.1
Min nTPM: 39.6
Sample A Male 39.6
Sample B Male 42.1
Sample C Female 42.2
Sample D Female 45.1
Hippocampal formation
nTPM: 45.2
Samples: 4

Max nTPM: 51.2
Min nTPM: 42.0
Sample A Male 51.2
Sample B Male 42.0
Sample C Female 42.1
Sample D Female 45.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68633279 Antisense, RP_050125_02_F04, Mouse strain C57BL/6J (56 days, male) 1.2
70919328 Antisense, RP_050713_01_B03, Mouse strain C57BL/6J (56 days, male) 0.1

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