HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:785.6 nTPM
HPA Brain:676.7 nTPM
GTEx:785.6 nTPM
FANTOM5:696.2 Scaled Tags Per Million
Mouse:1283.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053761Antibody CAB033687Antibody CAB037077
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedLowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 676.7
Sample id Sample description nTPM
Hippocampus
nTPM: 603.8
1898 Male, age 80, left hemisphere 713.1
2621 Female, age 67, right hemisphere 685.2
1855 Male, age 76, left hemisphere 646.8
1911 Female, age 85, right hemisphere 563.0
2529 Female, age 94, left hemisphere 509.8
2148 Female, age 91, left hemisphere 504.5
Dentate gyrus
nTPM: 587.2
1927 Female, age 91, both hemispheres 712.5
2530 Female, age 94, left hemisphere 707.4
2010 Male, age 76, both hemispheres 679.9
2246 Female, age 85, both hemispheres 551.6
2528 Male, age 74, both hemispheres 447.2
2531 Female, age 67, both hemispheres 424.6
Entorhinal gyrus
nTPM: 570.1
1938 Female, age 85, left hemisphere 641.4
2764 Male, age 80, right hemisphere 641.4
2613 Female, age 94, left hemisphere 609.3
1787 Male, age 76, left hemisphere 582.6
2117 Female, age 91, right hemisphere 520.2
2686 Male, age 75, right hemisphere 426.0
Hippocampus, CA1
nTPM: 676.7
2749 Male, age 80, left hemisphere 1181.2
1873 Female, age 85, both hemispheres 634.5
2527 Male, age 74, both hemispheres 550.5
2045 Male, age 76, both hemispheres 531.7
2082 Female, age 91, right hemisphere 485.7
Hippocampus, CA2
nTPM: 623.8
1892 Male, age 76, both hemispheres 807.9
1963 Male, age 80, left hemisphere 747.4
2249 Male, age 74, both hemispheres 590.5
2437 Female, age 94, left hemisphere 569.5
1940 Female, age 85, left hemisphere 524.7
2113 Female, age 91, right hemisphere 503.0
Hippocampus, CA3
nTPM: 594.0
2137 Male, age 80, left hemisphere 918.6
1867 Male, age 76, both hemispheres 707.9
2436 Male, age 74, both hemispheres 529.6
1891 Female, age 85, both hemispheres 495.9
2620 Female, age 94, left hemisphere 481.6
2861 Female, age 67, both hemispheres 430.6
Parahippocampal cortex
nTPM: 576.1
2245 Female, age 91, both hemispheres 681.5
1933 Female, age 85, both hemispheres 652.2
1850 Male, age 80, both hemispheres 630.7
2250 Female, age 67, right hemisphere 619.2
2532 Female, age 72, left hemisphere 600.6
1990 Female, age 91, right hemisphere 579.6
2018 Male, age 76, both hemispheres 572.9
2622 Female, age 67, right hemisphere 492.9
2693 Female, age 94, both hemispheres 471.0
2692 Male, age 74, both hemispheres 460.6
Perirhinal gyrus
nTPM: 646.4
1847 Female, age 91, left hemisphere 762.8
1794 Male, age 80, right hemisphere 685.8
1841 Female, age 85, right hemisphere 675.8
2521 Female, age 94, right hemisphere 594.3
2848 Male, age 76, right hemisphere 513.3
Subiculum
nTPM: 559.7
1901 Male, age 80, both hemispheres 684.1
2042 Male, age 76, both hemispheres 640.5
1977 Female, age 85, both hemispheres 593.8
2438 Female, age 94, left hemisphere 532.5
2619 Male, age 74, both hemispheres 474.0
2729 Female, age 91, right hemisphere 433.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 785.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 785.6
Samples: 197

Max nTPM: 1658.8
Min nTPM: 378.3
Std nTPM: 247.4
Median nTPM: 735.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1658.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1499.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1463.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1446.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1418.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 1406.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 1348.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1330.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1328.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1308.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 1303.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 696.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 696.2
FF:10169-103B7 60 years, female 755.0
FF:10153-102I9 76 years, female 637.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1283.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1211.8
Samples: 4

Max nTPM: 1354.9
Min nTPM: 1130.6
Sample A Male 1130.6
Sample B Male 1171.9
Sample C Female 1189.8
Sample D Female 1354.9
Hippocampal formation
nTPM: 1283.7
Samples: 4

Max nTPM: 1379.6
Min nTPM: 1203.1
Sample A Male 1318.2
Sample B Male 1203.1
Sample C Female 1379.6
Sample D Female 1234.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70719651 Antisense, RP_050426_02_D11, Mouse strain C57BL/6J (56 days, male) 0.3

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