HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:10.4 nTPM
HPA Brain:13.1 nTPM
GTEx:10.4 nTPM
FANTOM5:84.7 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:37.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059930
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.1
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
1898 Male, age 80, left hemisphere 13.8
2621 Female, age 67, right hemisphere 13.6
2148 Female, age 91, left hemisphere 12.9
1855 Male, age 76, left hemisphere 10.7
2529 Female, age 94, left hemisphere 10.6
1911 Female, age 85, right hemisphere 9.3
Dentate gyrus
nTPM: 12.2
1927 Female, age 91, both hemispheres 14.2
2531 Female, age 67, both hemispheres 13.5
2530 Female, age 94, left hemisphere 12.1
2010 Male, age 76, both hemispheres 11.5
2528 Male, age 74, both hemispheres 10.9
2246 Female, age 85, both hemispheres 10.8
Entorhinal gyrus
nTPM: 12.1
2764 Male, age 80, right hemisphere 13.4
2686 Male, age 75, right hemisphere 13.3
2613 Female, age 94, left hemisphere 12.6
1787 Male, age 76, left hemisphere 11.5
1938 Female, age 85, left hemisphere 11.3
2117 Female, age 91, right hemisphere 10.9
Hippocampus, CA1
nTPM: 12.7
2749 Male, age 80, left hemisphere 16.7
2045 Male, age 76, both hemispheres 13.4
1873 Female, age 85, both hemispheres 12.1
2082 Female, age 91, right hemisphere 10.7
2527 Male, age 74, both hemispheres 10.7
Hippocampus, CA2
nTPM: 12.0
1892 Male, age 76, both hemispheres 15.8
1963 Male, age 80, left hemisphere 14.8
2437 Female, age 94, left hemisphere 10.7
2113 Female, age 91, right hemisphere 10.5
1940 Female, age 85, left hemisphere 10.2
2249 Male, age 74, both hemispheres 10.1
Hippocampus, CA3
nTPM: 12.1
2137 Male, age 80, left hemisphere 14.4
1867 Male, age 76, both hemispheres 12.8
2861 Female, age 67, both hemispheres 12.8
2620 Female, age 94, left hemisphere 11.4
1891 Female, age 85, both hemispheres 10.5
2436 Male, age 74, both hemispheres 10.5
Parahippocampal cortex
nTPM: 11.7
1850 Male, age 80, both hemispheres 13.8
2693 Female, age 94, both hemispheres 12.2
1933 Female, age 85, both hemispheres 11.9
2245 Female, age 91, both hemispheres 11.7
2250 Female, age 67, right hemisphere 11.7
2622 Female, age 67, right hemisphere 11.6
2532 Female, age 72, left hemisphere 11.4
1990 Female, age 91, right hemisphere 11.2
2018 Male, age 76, both hemispheres 11.2
2692 Male, age 74, both hemispheres 10.4
Perirhinal gyrus
nTPM: 13.1
1794 Male, age 80, right hemisphere 14.6
1841 Female, age 85, right hemisphere 13.3
2848 Male, age 76, right hemisphere 13.1
1847 Female, age 91, left hemisphere 12.8
2521 Female, age 94, right hemisphere 11.6
Subiculum
nTPM: 11.1
1977 Female, age 85, both hemispheres 12.3
2438 Female, age 94, left hemisphere 11.5
2729 Female, age 91, right hemisphere 11.5
1901 Male, age 80, both hemispheres 11.2
2619 Male, age 74, both hemispheres 10.3
2042 Male, age 76, both hemispheres 9.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 23.0
Min nTPM: 3.1
Std nTPM: 2.8
Median nTPM: 10.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 21.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 18.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 18.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 17.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 15.2
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 15.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 15.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 14.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 14.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 14.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.7
FF:10169-103B7 60 years, female 87.2
FF:10153-102I9 76 years, female 82.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.2
Pig sample Sample description nTPM
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 18.4
Min nTPM: 11.9
Sample A Female 18.4
Sample B Female 13.0
Sample C Male 11.9
Sample D Male 13.7
Dorsal hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 23.2
Min nTPM: 17.0
Sample A Female 23.2
Sample B Female 17.0
Sample C Male 18.6
Sample D Male 18.2
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 19.6
Min nTPM: 12.4
Sample A Female 16.6
Sample B Female 19.6
Sample C Male 15.8
Sample D Male 12.4
Ventral hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 18.0
Min nTPM: 12.5
Sample A Female 18.0
Sample B Female 12.5
Sample C Male 16.1
Sample D Male 15.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.0
Samples: 4

Max nTPM: 37.7
Min nTPM: 34.0
Sample A Male 34.0
Sample B Male 34.0
Sample C Female 37.7
Sample D Female 34.1
Hippocampal formation
nTPM: 37.9
Samples: 4

Max nTPM: 39.4
Min nTPM: 35.5
Sample A Male 39.4
Sample B Male 37.5
Sample C Female 39.2
Sample D Female 35.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71212141 Antisense, RP_050816_02_H06, Mouse strain C57BL/6J (56 days, male) 0.4

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