HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:50.5 nTPM
HPA Brain:22.2 nTPM
GTEx:50.5 nTPM
FANTOM5:8.3 Scaled Tags Per Million
Pig:37.1 nTPM
Mouse:19.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053882
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.2
Sample id Sample description nTPM
Hippocampus
nTPM: 22.2
2529 Female, age 94, left hemisphere 24.6
2148 Female, age 91, left hemisphere 24.3
1898 Male, age 80, left hemisphere 23.2
2621 Female, age 67, right hemisphere 21.3
1855 Male, age 76, left hemisphere 20.2
1911 Female, age 85, right hemisphere 19.3
Dentate gyrus
nTPM: 19.2
2530 Female, age 94, left hemisphere 24.0
2010 Male, age 76, both hemispheres 21.8
2531 Female, age 67, both hemispheres 19.0
1927 Female, age 91, both hemispheres 17.3
2528 Male, age 74, both hemispheres 17.3
2246 Female, age 85, both hemispheres 15.7
Entorhinal gyrus
nTPM: 18.9
2117 Female, age 91, right hemisphere 24.8
2686 Male, age 75, right hemisphere 21.7
1938 Female, age 85, left hemisphere 18.4
2764 Male, age 80, right hemisphere 16.9
1787 Male, age 76, left hemisphere 16.3
2613 Female, age 94, left hemisphere 15.3
Hippocampus, CA1
nTPM: 18.9
2527 Male, age 74, both hemispheres 23.5
1873 Female, age 85, both hemispheres 20.5
2749 Male, age 80, left hemisphere 18.7
2045 Male, age 76, both hemispheres 17.1
2082 Female, age 91, right hemisphere 14.5
Hippocampus, CA2
nTPM: 19.9
1963 Male, age 80, left hemisphere 23.0
1940 Female, age 85, left hemisphere 22.0
2437 Female, age 94, left hemisphere 20.6
2249 Male, age 74, both hemispheres 20.0
1892 Male, age 76, both hemispheres 17.8
2113 Female, age 91, right hemisphere 16.2
Hippocampus, CA3
nTPM: 20.9
2861 Female, age 67, both hemispheres 24.4
1867 Male, age 76, both hemispheres 23.9
2436 Male, age 74, both hemispheres 22.4
2620 Female, age 94, left hemisphere 19.6
2137 Male, age 80, left hemisphere 18.1
1891 Female, age 85, both hemispheres 17.3
Parahippocampal cortex
nTPM: 18.6
2622 Female, age 67, right hemisphere 24.2
2018 Male, age 76, both hemispheres 22.1
2692 Male, age 74, both hemispheres 21.9
2245 Female, age 91, both hemispheres 20.0
2250 Female, age 67, right hemisphere 19.2
1933 Female, age 85, both hemispheres 17.9
1990 Female, age 91, right hemisphere 17.6
2532 Female, age 72, left hemisphere 15.5
1850 Male, age 80, both hemispheres 14.8
2693 Female, age 94, both hemispheres 13.0
Perirhinal gyrus
nTPM: 14.5
1847 Female, age 91, left hemisphere 16.8
2521 Female, age 94, right hemisphere 16.3
1794 Male, age 80, right hemisphere 13.7
1841 Female, age 85, right hemisphere 13.0
2848 Male, age 76, right hemisphere 12.6
Subiculum
nTPM: 21.7
2619 Male, age 74, both hemispheres 23.3
2042 Male, age 76, both hemispheres 23.2
2729 Female, age 91, right hemisphere 22.5
2438 Female, age 94, left hemisphere 22.3
1901 Male, age 80, both hemispheres 21.2
1977 Female, age 85, both hemispheres 17.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.5
Samples: 197

Max nTPM: 112.9
Min nTPM: 18.8
Std nTPM: 20.0
Median nTPM: 46.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 112.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 109.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 106.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 103.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 101.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 99.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 98.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 98.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 94.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 94.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 86.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.3
FF:10153-102I9 76 years, female 10.5
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.1
Pig sample Sample description nTPM
Subiculum
nTPM: 35.2
Samples: 4

Max nTPM: 47.6
Min nTPM: 30.5
Sample A Female 47.6
Sample B Female 31.3
Sample C Male 30.5
Sample D Male 31.5
Dorsal hippocampus
nTPM: 35.9
Samples: 4

Max nTPM: 50.0
Min nTPM: 21.4
Sample A Female 50.0
Sample B Female 31.6
Sample C Male 40.4
Sample D Male 21.4
Entorhinal cortex
nTPM: 28.3
Samples: 4

Max nTPM: 34.3
Min nTPM: 16.6
Sample A Female 29.1
Sample B Female 34.3
Sample C Male 33.3
Sample D Male 16.6
Ventral hippocampus
nTPM: 37.1
Samples: 4

Max nTPM: 44.6
Min nTPM: 30.2
Sample A Female 41.9
Sample B Female 31.7
Sample C Male 44.6
Sample D Male 30.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.2
Samples: 4

Max nTPM: 20.8
Min nTPM: 17.0
Sample A Male 20.8
Sample B Male 19.1
Sample C Female 19.9
Sample D Female 17.0
Hippocampal formation
nTPM: 19.0
Samples: 4

Max nTPM: 20.8
Min nTPM: 16.7
Sample A Male 16.7
Sample B Male 19.0
Sample C Female 19.3
Sample D Female 20.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70723531 Antisense, RP_050705_01_C06, Mouse strain C57BL/6J (56 days, male) 0.1
73512186 Antisense, RP_050705_01_C06, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org