HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:57.9 nTPM
HPA Brain:79.8 nTPM
GTEx:57.9 nTPM
FANTOM5:64.9 Scaled Tags Per Million
Pig:57.8 nTPM
Mouse:24.5 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042174Antibody HPA047849
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.8
Sample id Sample description nTPM
Hippocampus
nTPM: 75.7
2621 Female, age 67, right hemisphere 80.6
1911 Female, age 85, right hemisphere 77.0
1855 Male, age 76, left hemisphere 76.9
1898 Male, age 80, left hemisphere 75.3
2148 Female, age 91, left hemisphere 74.3
2529 Female, age 94, left hemisphere 70.3
Dentate gyrus
nTPM: 79.5
2531 Female, age 67, both hemispheres 90.2
2246 Female, age 85, both hemispheres 87.3
1927 Female, age 91, both hemispheres 80.0
2528 Male, age 74, both hemispheres 76.1
2010 Male, age 76, both hemispheres 74.7
2530 Female, age 94, left hemisphere 68.4
Entorhinal gyrus
nTPM: 75.6
1938 Female, age 85, left hemisphere 81.3
2613 Female, age 94, left hemisphere 77.3
2764 Male, age 80, right hemisphere 75.3
2686 Male, age 75, right hemisphere 74.8
1787 Male, age 76, left hemisphere 73.4
2117 Female, age 91, right hemisphere 71.8
Hippocampus, CA1
nTPM: 79.6
2045 Male, age 76, both hemispheres 85.6
1873 Female, age 85, both hemispheres 81.6
2749 Male, age 80, left hemisphere 79.6
2082 Female, age 91, right hemisphere 77.0
2527 Male, age 74, both hemispheres 74.5
Hippocampus, CA2
nTPM: 77.5
1963 Male, age 80, left hemisphere 81.0
2113 Female, age 91, right hemisphere 78.7
1892 Male, age 76, both hemispheres 78.1
1940 Female, age 85, left hemisphere 77.6
2437 Female, age 94, left hemisphere 75.1
2249 Male, age 74, both hemispheres 74.4
Hippocampus, CA3
nTPM: 79.8
2137 Male, age 80, left hemisphere 84.8
2436 Male, age 74, both hemispheres 82.7
2620 Female, age 94, left hemisphere 82.4
2861 Female, age 67, both hemispheres 78.7
1891 Female, age 85, both hemispheres 78.5
1867 Male, age 76, both hemispheres 71.8
Parahippocampal cortex
nTPM: 77.1
2693 Female, age 94, both hemispheres 83.3
2622 Female, age 67, right hemisphere 79.3
2692 Male, age 74, both hemispheres 78.7
2250 Female, age 67, right hemisphere 78.5
2245 Female, age 91, both hemispheres 77.8
2532 Female, age 72, left hemisphere 77.2
1933 Female, age 85, both hemispheres 76.1
1850 Male, age 80, both hemispheres 74.8
2018 Male, age 76, both hemispheres 73.8
1990 Female, age 91, right hemisphere 71.3
Perirhinal gyrus
nTPM: 77.8
1847 Female, age 91, left hemisphere 83.9
1841 Female, age 85, right hemisphere 82.5
2521 Female, age 94, right hemisphere 75.5
1794 Male, age 80, right hemisphere 74.3
2848 Male, age 76, right hemisphere 72.8
Subiculum
nTPM: 73.3
2042 Male, age 76, both hemispheres 76.6
2729 Female, age 91, right hemisphere 76.0
1977 Female, age 85, both hemispheres 75.6
1901 Male, age 80, both hemispheres 74.3
2619 Male, age 74, both hemispheres 72.5
2438 Female, age 94, left hemisphere 64.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.9
Samples: 197

Max nTPM: 120.5
Min nTPM: 33.9
Std nTPM: 10.6
Median nTPM: 56.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 120.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 92.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 90.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 87.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 84.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 84.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 81.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 79.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 76.5
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 73.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 72.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.9
FF:10169-103B7 60 years, female 75.8
FF:10153-102I9 76 years, female 53.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.8
Pig sample Sample description nTPM
Subiculum
nTPM: 52.6
Samples: 4

Max nTPM: 59.8
Min nTPM: 47.8
Sample A Female 59.8
Sample B Female 53.7
Sample C Male 48.9
Sample D Male 47.8
Dorsal hippocampus
nTPM: 57.8
Samples: 4

Max nTPM: 67.7
Min nTPM: 50.6
Sample A Female 67.7
Sample B Female 56.6
Sample C Male 50.6
Sample D Male 56.3
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 49.7
Min nTPM: 44.9
Sample A Female 49.7
Sample B Female 46.6
Sample C Male 49.0
Sample D Male 44.9
Ventral hippocampus
nTPM: 56.3
Samples: 4

Max nTPM: 59.8
Min nTPM: 50.9
Sample A Female 56.8
Sample B Female 50.9
Sample C Male 57.6
Sample D Male 59.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 21.5
Min nTPM: 18.4
Sample A Male 18.4
Sample B Male 18.6
Sample C Female 21.5
Sample D Female 19.0
Hippocampal formation
nTPM: 24.5
Samples: 4

Max nTPM: 26.2
Min nTPM: 20.6
Sample A Male 26.2
Sample B Male 20.6
Sample C Female 25.6
Sample D Female 25.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
888 Antisense, RP_Baylor_103001, Mouse strain C57BL/6J (56 days, male) 6.7
889 Antisense, RP_Baylor_103001, Mouse strain C57BL/6J (56 days, male) 2.9
74431604 Antisense, RP_060207_02_B12, Mouse strain C57BL/6J (56 days, male) 0.2

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