HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:43.1 nTPM
HPA Brain:127.3 nTPM
GTEx:43.1 nTPM
FANTOM5:199.8 Scaled Tags Per Million
Pig:124.0 nTPM
Mouse:170.6 nTPM
Allen mouse:20.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064471
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 127.3
Sample id Sample description nTPM
Hippocampus
nTPM: 96.9
2621 Female, age 67, right hemisphere 123.1
1898 Male, age 80, left hemisphere 119.8
1855 Male, age 76, left hemisphere 103.5
2148 Female, age 91, left hemisphere 86.1
1911 Female, age 85, right hemisphere 79.6
2529 Female, age 94, left hemisphere 69.6
Dentate gyrus
nTPM: 109.9
2530 Female, age 94, left hemisphere 145.7
1927 Female, age 91, both hemispheres 130.9
2010 Male, age 76, both hemispheres 109.0
2531 Female, age 67, both hemispheres 104.2
2246 Female, age 85, both hemispheres 94.2
2528 Male, age 74, both hemispheres 75.4
Entorhinal gyrus
nTPM: 118.4
2613 Female, age 94, left hemisphere 185.8
2764 Male, age 80, right hemisphere 134.0
1787 Male, age 76, left hemisphere 124.5
1938 Female, age 85, left hemisphere 118.1
2686 Male, age 75, right hemisphere 80.0
2117 Female, age 91, right hemisphere 67.8
Hippocampus, CA1
nTPM: 118.9
2749 Male, age 80, left hemisphere 196.1
2045 Male, age 76, both hemispheres 124.0
1873 Female, age 85, both hemispheres 106.9
2527 Male, age 74, both hemispheres 92.1
2082 Female, age 91, right hemisphere 75.5
Hippocampus, CA2
nTPM: 102.1
1892 Male, age 76, both hemispheres 140.2
2437 Female, age 94, left hemisphere 134.5
1963 Male, age 80, left hemisphere 118.7
1940 Female, age 85, left hemisphere 86.2
2249 Male, age 74, both hemispheres 69.7
2113 Female, age 91, right hemisphere 63.2
Hippocampus, CA3
nTPM: 111.5
2620 Female, age 94, left hemisphere 156.9
2137 Male, age 80, left hemisphere 137.6
1867 Male, age 76, both hemispheres 116.8
2861 Female, age 67, both hemispheres 101.3
1891 Female, age 85, both hemispheres 83.6
2436 Male, age 74, both hemispheres 72.5
Parahippocampal cortex
nTPM: 103.3
1990 Female, age 91, right hemisphere 125.5
2693 Female, age 94, both hemispheres 119.0
1850 Male, age 80, both hemispheres 116.3
2245 Female, age 91, both hemispheres 114.4
2250 Female, age 67, right hemisphere 112.3
1933 Female, age 85, both hemispheres 101.2
2532 Female, age 72, left hemisphere 98.9
2622 Female, age 67, right hemisphere 93.6
2692 Male, age 74, both hemispheres 76.0
2018 Male, age 76, both hemispheres 75.5
Perirhinal gyrus
nTPM: 127.3
1847 Female, age 91, left hemisphere 165.3
1794 Male, age 80, right hemisphere 136.3
2521 Female, age 94, right hemisphere 136.3
2848 Male, age 76, right hemisphere 101.6
1841 Female, age 85, right hemisphere 97.2
Subiculum
nTPM: 94.2
2438 Female, age 94, left hemisphere 119.8
1977 Female, age 85, both hemispheres 114.9
1901 Male, age 80, both hemispheres 109.2
2619 Male, age 74, both hemispheres 91.2
2042 Male, age 76, both hemispheres 75.2
2729 Female, age 91, right hemisphere 54.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.1
Samples: 197

Max nTPM: 122.5
Min nTPM: 4.4
Std nTPM: 24.0
Median nTPM: 38.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 122.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 112.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 102.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 95.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 95.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 93.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 93.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 92.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 91.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 89.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 88.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 199.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 199.8
FF:10169-103B7 60 years, female 234.7
FF:10153-102I9 76 years, female 165.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 124.0
Pig sample Sample description nTPM
Subiculum
nTPM: 97.6
Samples: 4

Max nTPM: 133.6
Min nTPM: 76.7
Sample A Female 133.6
Sample B Female 78.0
Sample C Male 102.1
Sample D Male 76.7
Dorsal hippocampus
nTPM: 123.8
Samples: 4

Max nTPM: 152.8
Min nTPM: 85.9
Sample A Female 152.8
Sample B Female 150.3
Sample C Male 85.9
Sample D Male 106.1
Entorhinal cortex
nTPM: 123.9
Samples: 4

Max nTPM: 156.2
Min nTPM: 106.6
Sample A Female 156.2
Sample B Female 106.6
Sample C Male 117.3
Sample D Male 115.4
Ventral hippocampus
nTPM: 124.0
Samples: 4

Max nTPM: 151.1
Min nTPM: 72.0
Sample A Female 123.0
Sample B Female 72.0
Sample C Male 151.1
Sample D Male 149.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 170.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 142.9
Samples: 4

Max nTPM: 170.4
Min nTPM: 128.2
Sample A Male 141.6
Sample B Male 128.2
Sample C Female 131.3
Sample D Female 170.4
Hippocampal formation
nTPM: 170.6
Samples: 4

Max nTPM: 215.7
Min nTPM: 129.3
Sample A Male 129.3
Sample B Male 174.5
Sample C Female 215.7
Sample D Female 163.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.0
1408 Antisense, RP_040625_02_B11, Mouse strain C57BL/6J (56 days, male) 20.0
1407 Antisense, RP_040625_02_B11, Mouse strain C57BL/6J (56 days, male) 6.7

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