HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:53.7 nTPM
HPA Brain:79.2 nTPM
GTEx:53.7 nTPM
FANTOM5:100.7 Scaled Tags Per Million
Pig:99.8 nTPM
Mouse:163.4 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045192Antibody HPA062363
Glial cells LowLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.2
Sample id Sample description nTPM
Hippocampus
nTPM: 71.2
1898 Male, age 80, left hemisphere 96.7
2148 Female, age 91, left hemisphere 71.1
2529 Female, age 94, left hemisphere 68.9
1855 Male, age 76, left hemisphere 68.8
2621 Female, age 67, right hemisphere 66.7
1911 Female, age 85, right hemisphere 55.0
Dentate gyrus
nTPM: 68.8
2010 Male, age 76, both hemispheres 78.6
1927 Female, age 91, both hemispheres 77.6
2530 Female, age 94, left hemisphere 74.7
2528 Male, age 74, both hemispheres 65.6
2246 Female, age 85, both hemispheres 59.6
2531 Female, age 67, both hemispheres 56.6
Entorhinal gyrus
nTPM: 67.3
2764 Male, age 80, right hemisphere 78.8
1938 Female, age 85, left hemisphere 70.2
2613 Female, age 94, left hemisphere 66.9
2117 Female, age 91, right hemisphere 66.7
1787 Male, age 76, left hemisphere 62.3
2686 Male, age 75, right hemisphere 59.2
Hippocampus, CA1
nTPM: 79.2
2749 Male, age 80, left hemisphere 116.2
1873 Female, age 85, both hemispheres 76.7
2045 Male, age 76, both hemispheres 70.1
2527 Male, age 74, both hemispheres 67.1
2082 Female, age 91, right hemisphere 66.1
Hippocampus, CA2
nTPM: 76.5
1963 Male, age 80, left hemisphere 103.7
1892 Male, age 76, both hemispheres 94.3
2113 Female, age 91, right hemisphere 67.5
1940 Female, age 85, left hemisphere 66.7
2437 Female, age 94, left hemisphere 63.7
2249 Male, age 74, both hemispheres 63.0
Hippocampus, CA3
nTPM: 73.5
2137 Male, age 80, left hemisphere 90.4
1867 Male, age 76, both hemispheres 86.6
2436 Male, age 74, both hemispheres 68.2
2620 Female, age 94, left hemisphere 67.1
2861 Female, age 67, both hemispheres 65.9
1891 Female, age 85, both hemispheres 62.5
Parahippocampal cortex
nTPM: 64.4
1850 Male, age 80, both hemispheres 85.4
1990 Female, age 91, right hemisphere 67.4
1933 Female, age 85, both hemispheres 67.3
2245 Female, age 91, both hemispheres 66.8
2532 Female, age 72, left hemisphere 61.1
2018 Male, age 76, both hemispheres 60.9
2692 Male, age 74, both hemispheres 60.4
2693 Female, age 94, both hemispheres 60.3
2250 Female, age 67, right hemisphere 59.2
2622 Female, age 67, right hemisphere 55.2
Perirhinal gyrus
nTPM: 76.1
1847 Female, age 91, left hemisphere 86.8
1794 Male, age 80, right hemisphere 84.5
1841 Female, age 85, right hemisphere 74.8
2521 Female, age 94, right hemisphere 72.1
2848 Male, age 76, right hemisphere 62.5
Subiculum
nTPM: 63.7
1901 Male, age 80, both hemispheres 74.8
1977 Female, age 85, both hemispheres 70.0
2729 Female, age 91, right hemisphere 62.7
2619 Male, age 74, both hemispheres 62.3
2042 Male, age 76, both hemispheres 58.4
2438 Female, age 94, left hemisphere 54.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.7
Samples: 197

Max nTPM: 84.7
Min nTPM: 33.3
Std nTPM: 11.3
Median nTPM: 52.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 84.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 84.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 82.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 81.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 79.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 78.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 78.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 77.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 76.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 76.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 76.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.7
FF:10153-102I9 76 years, female 110.1
FF:10169-103B7 60 years, female 91.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 99.8
Pig sample Sample description nTPM
Subiculum
nTPM: 80.6
Samples: 4

Max nTPM: 101.3
Min nTPM: 70.6
Sample A Female 101.3
Sample B Female 75.2
Sample C Male 75.3
Sample D Male 70.6
Dorsal hippocampus
nTPM: 99.8
Samples: 4

Max nTPM: 127.5
Min nTPM: 73.2
Sample A Female 127.5
Sample B Female 105.4
Sample C Male 93.1
Sample D Male 73.2
Entorhinal cortex
nTPM: 85.6
Samples: 4

Max nTPM: 98.8
Min nTPM: 66.0
Sample A Female 95.8
Sample B Female 98.8
Sample C Male 81.6
Sample D Male 66.0
Ventral hippocampus
nTPM: 91.9
Samples: 4

Max nTPM: 107.0
Min nTPM: 62.2
Sample A Female 103.6
Sample B Female 62.2
Sample C Male 107.0
Sample D Male 94.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 163.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 157.7
Samples: 4

Max nTPM: 175.0
Min nTPM: 150.1
Sample A Male 150.1
Sample B Male 152.4
Sample C Female 153.1
Sample D Female 175.0
Hippocampal formation
nTPM: 163.4
Samples: 4

Max nTPM: 177.5
Min nTPM: 156.1
Sample A Male 161.4
Sample B Male 158.4
Sample C Female 177.5
Sample D Female 156.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
68157415 Antisense, RP_041116_02_F08, Mouse strain C57BL/6J (56 days, male) 11.7

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