HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:38.0 nTPM
HPA Brain:17.9 nTPM
GTEx:38.0 nTPM
FANTOM5:19.8 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:28.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019545
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
1898 Male, age 80, left hemisphere 21.2
2621 Female, age 67, right hemisphere 21.1
2529 Female, age 94, left hemisphere 17.9
1855 Male, age 76, left hemisphere 15.2
2148 Female, age 91, left hemisphere 14.7
1911 Female, age 85, right hemisphere 14.0
Dentate gyrus
nTPM: 16.4
2528 Male, age 74, both hemispheres 18.6
2010 Male, age 76, both hemispheres 17.9
1927 Female, age 91, both hemispheres 16.6
2531 Female, age 67, both hemispheres 15.6
2246 Female, age 85, both hemispheres 15.0
2530 Female, age 94, left hemisphere 14.5
Entorhinal gyrus
nTPM: 15.2
2764 Male, age 80, right hemisphere 18.5
2686 Male, age 75, right hemisphere 15.6
2613 Female, age 94, left hemisphere 15.0
1938 Female, age 85, left hemisphere 14.6
1787 Male, age 76, left hemisphere 14.2
2117 Female, age 91, right hemisphere 13.6
Hippocampus, CA1
nTPM: 17.9
2749 Male, age 80, left hemisphere 25.0
1873 Female, age 85, both hemispheres 18.9
2527 Male, age 74, both hemispheres 17.2
2045 Male, age 76, both hemispheres 15.4
2082 Female, age 91, right hemisphere 13.2
Hippocampus, CA2
nTPM: 17.8
2249 Male, age 74, both hemispheres 21.0
1892 Male, age 76, both hemispheres 20.0
1963 Male, age 80, left hemisphere 19.0
1940 Female, age 85, left hemisphere 17.1
2437 Female, age 94, left hemisphere 14.8
2113 Female, age 91, right hemisphere 14.6
Hippocampus, CA3
nTPM: 17.7
2137 Male, age 80, left hemisphere 24.2
1867 Male, age 76, both hemispheres 21.1
1891 Female, age 85, both hemispheres 19.2
2436 Male, age 74, both hemispheres 15.8
2620 Female, age 94, left hemisphere 13.0
2861 Female, age 67, both hemispheres 12.8
Parahippocampal cortex
nTPM: 15.2
1850 Male, age 80, both hemispheres 17.4
1933 Female, age 85, both hemispheres 16.9
2692 Male, age 74, both hemispheres 16.9
2250 Female, age 67, right hemisphere 15.9
2018 Male, age 76, both hemispheres 15.4
2245 Female, age 91, both hemispheres 15.2
1990 Female, age 91, right hemisphere 15.0
2693 Female, age 94, both hemispheres 14.7
2622 Female, age 67, right hemisphere 12.7
2532 Female, age 72, left hemisphere 12.0
Perirhinal gyrus
nTPM: 17.4
1847 Female, age 91, left hemisphere 20.3
1794 Male, age 80, right hemisphere 19.2
1841 Female, age 85, right hemisphere 18.5
2521 Female, age 94, right hemisphere 14.8
2848 Male, age 76, right hemisphere 14.1
Subiculum
nTPM: 15.5
2042 Male, age 76, both hemispheres 18.8
2619 Male, age 74, both hemispheres 16.8
1977 Female, age 85, both hemispheres 16.3
2729 Female, age 91, right hemisphere 16.3
1901 Male, age 80, both hemispheres 13.5
2438 Female, age 94, left hemisphere 11.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.0
Samples: 197

Max nTPM: 86.2
Min nTPM: 15.3
Std nTPM: 10.3
Median nTPM: 36.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 86.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 85.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 68.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 66.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 63.7
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 61.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 57.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 57.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 56.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 56.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 55.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.8
FF:10153-102I9 76 years, female 24.1
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 18.7
Min nTPM: 14.4
Sample A Female 18.7
Sample B Female 16.0
Sample C Male 14.4
Sample D Male 14.9
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 21.3
Min nTPM: 15.3
Sample A Female 21.3
Sample B Female 16.1
Sample C Male 18.8
Sample D Male 15.3
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 18.8
Min nTPM: 12.0
Sample A Female 15.2
Sample B Female 18.8
Sample C Male 14.3
Sample D Male 12.0
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 17.1
Min nTPM: 14.4
Sample A Female 17.1
Sample B Female 14.4
Sample C Male 16.0
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 26.8
Min nTPM: 21.1
Sample A Male 26.8
Sample B Male 25.1
Sample C Female 24.9
Sample D Female 21.1
Hippocampal formation
nTPM: 28.0
Samples: 4

Max nTPM: 31.7
Min nTPM: 23.6
Sample A Male 31.7
Sample B Male 30.0
Sample C Female 23.6
Sample D Female 26.7

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