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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
40.1
nTPM
HPA Brain:
41.8
nTPM
GTEx:
40.1
nTPM
FANTOM5:
37.6
Scaled Tags Per Million
Pig:
6.1
nTPM
Mouse:
7.4
nTPM
Allen mouse:
1.1
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max nTPM
41.8
Sample id
Sample description
nTPM
Amygdala nTPM: 41.8
2695
Female, age 67, right hemisphere
68.8
1987
Female, age 91, left hemisphere
45.0
2814
Male, age 76, right hemisphere
40.4
2514
Male, age 75, right hemisphere
29.9
2517
Female, age 94, left hemisphere
25.0
Basal amygdala nTPM: 33.0
2609
Male, age 75, right hemisphere
49.7
2243
Female, age 91, right hemisphere
45.4
1955
Male, age 76, both hemispheres
37.2
2685
Female, age 94, left hemisphere
24.4
2110
Male, age 80, left hemisphere
23.2
2827
Female, age 67, right hemisphere
18.4
Central amygdala nTPM: 37.8
2515
Male, age 75, right hemisphere
45.0
1905
Male, age 76, both hemispheres
42.5
2701
Female, age 91, right hemisphere
39.4
2826
Female, age 94, left hemisphere
33.5
2239
Male, age 80, left hemisphere
28.9
Corticomedial amygdala nTPM: 29.4
2242
Female, age 91, right hemisphere
39.4
2428
Male, age 75, right hemisphere
35.6
2240
Male, age 76, both hemispheres
30.7
2829
Male, age 80, left hemisphere
26.9
2535
Female, age 67, right hemisphere
24.0
2429
Female, age 94, left hemisphere
20.2
Lateral amygdala nTPM: 33.4
2516
Male, age 75, right hemisphere
40.6
2255
Female, age 91, right hemisphere
40.2
2256
Male, age 80, left hemisphere
38.8
1883
Male, age 76, both hemispheres
29.5
2534
Female, age 94, left hemisphere
27.0
2830
Female, age 67, right hemisphere
24.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
40.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 40.1
Samples: 152
Max nTPM: 129.4
Min nTPM: 3.3
Std nTPM: 20.4
Median nTPM: 36.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
129.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
110.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
103.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
100.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
92.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
89.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
83.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
77.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
77.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
74.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
72.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
71.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
68.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
68.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
67.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
67.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
66.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
65.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
63.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
58.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
58.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
57.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
57.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
56.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
55.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
55.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
54.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
54.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
54.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
53.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
53.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
52.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
52.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
52.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
51.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
51.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
50.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
50.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
48.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
48.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
47.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
47.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
46.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
46.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
45.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
44.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
44.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
44.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
44.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
43.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
43.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
43.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
43.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
43.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
42.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
42.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
41.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
41.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
40.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
40.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
40.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
40.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
39.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
39.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
39.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
39.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
39.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
38.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
38.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
37.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
37.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
37.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
37.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
36.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
36.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
36.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
36.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
36.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
36.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
35.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
35.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
35.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
34.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
34.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
33.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
33.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
32.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
32.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
32.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
31.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
31.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
30.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
30.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
30.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
30.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
29.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
29.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
29.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
29.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
29.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
29.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
29.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
29.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
28.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
28.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
28.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
28.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
28.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
28.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
28.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
27.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
27.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
27.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
27.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
26.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
26.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
26.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
25.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
25.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
25.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
25.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
24.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
24.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
24.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
23.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
23.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
23.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
22.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
21.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
21.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
21.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
21.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
21.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
20.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
19.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
19.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
19.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
19.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
18.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
18.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
18.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
18.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
16.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
16.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
16.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
15.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
15.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
14.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
9.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
5.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
4.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
3.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
7.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 7.4
Samples: 4
Max nTPM: 8.6
Min nTPM: 5.6
Sample A
Male
5.6
Sample B
Male
8.6
Sample C
Female
8.6
Sample D
Female
6.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.