HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:27.8 nTPM
HPA Brain:44.4 nTPM
GTEx:27.8 nTPM
FANTOM5:70.7 Scaled Tags Per Million
Pig:41.1 nTPM
Mouse:14.0 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039743Antibody HPA040168
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.4
Sample id Sample description nTPM
Hippocampus
nTPM: 39.2
1911 Female, age 85, right hemisphere 43.6
2529 Female, age 94, left hemisphere 42.6
1855 Male, age 76, left hemisphere 37.6
2621 Female, age 67, right hemisphere 37.4
2148 Female, age 91, left hemisphere 37.0
1898 Male, age 80, left hemisphere 36.7
Dentate gyrus
nTPM: 40.4
1927 Female, age 91, both hemispheres 45.2
2010 Male, age 76, both hemispheres 41.5
2531 Female, age 67, both hemispheres 41.5
2246 Female, age 85, both hemispheres 40.4
2528 Male, age 74, both hemispheres 39.1
2530 Female, age 94, left hemisphere 34.5
Entorhinal gyrus
nTPM: 39.8
1938 Female, age 85, left hemisphere 45.3
2686 Male, age 75, right hemisphere 40.6
1787 Male, age 76, left hemisphere 40.0
2613 Female, age 94, left hemisphere 38.9
2764 Male, age 80, right hemisphere 37.8
2117 Female, age 91, right hemisphere 36.0
Hippocampus, CA1
nTPM: 43.3
2045 Male, age 76, both hemispheres 49.2
1873 Female, age 85, both hemispheres 46.2
2749 Male, age 80, left hemisphere 42.7
2527 Male, age 74, both hemispheres 39.8
2082 Female, age 91, right hemisphere 38.5
Hippocampus, CA2
nTPM: 38.0
1940 Female, age 85, left hemisphere 42.9
2113 Female, age 91, right hemisphere 40.2
1892 Male, age 76, both hemispheres 40.0
2437 Female, age 94, left hemisphere 37.1
2249 Male, age 74, both hemispheres 35.8
1963 Male, age 80, left hemisphere 31.9
Hippocampus, CA3
nTPM: 43.6
2620 Female, age 94, left hemisphere 56.6
2137 Male, age 80, left hemisphere 46.9
1891 Female, age 85, both hemispheres 44.4
1867 Male, age 76, both hemispheres 38.7
2861 Female, age 67, both hemispheres 37.7
2436 Male, age 74, both hemispheres 37.4
Parahippocampal cortex
nTPM: 44.3
2693 Female, age 94, both hemispheres 55.0
1850 Male, age 80, both hemispheres 48.4
2018 Male, age 76, both hemispheres 47.3
2622 Female, age 67, right hemisphere 45.8
2245 Female, age 91, both hemispheres 43.5
1933 Female, age 85, both hemispheres 42.8
2692 Male, age 74, both hemispheres 42.6
2250 Female, age 67, right hemisphere 41.4
2532 Female, age 72, left hemisphere 39.6
1990 Female, age 91, right hemisphere 36.7
Perirhinal gyrus
nTPM: 44.4
1841 Female, age 85, right hemisphere 50.0
2521 Female, age 94, right hemisphere 46.1
1847 Female, age 91, left hemisphere 43.1
1794 Male, age 80, right hemisphere 41.7
2848 Male, age 76, right hemisphere 41.1
Subiculum
nTPM: 35.1
2042 Male, age 76, both hemispheres 43.1
1901 Male, age 80, both hemispheres 40.8
1977 Female, age 85, both hemispheres 36.6
2729 Female, age 91, right hemisphere 35.1
2619 Male, age 74, both hemispheres 33.8
2438 Female, age 94, left hemisphere 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.8
Samples: 197

Max nTPM: 59.3
Min nTPM: 15.7
Std nTPM: 6.1
Median nTPM: 26.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 59.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 58.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 44.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 44.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 43.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 39.0
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 38.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 38.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 38.2
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 38.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.7
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 66.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.1
Pig sample Sample description nTPM
Subiculum
nTPM: 40.5
Samples: 4

Max nTPM: 42.6
Min nTPM: 37.8
Sample A Female 40.2
Sample B Female 42.6
Sample C Male 37.8
Sample D Male 41.2
Dorsal hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 42.8
Min nTPM: 39.0
Sample A Female 41.7
Sample B Female 40.7
Sample C Male 39.0
Sample D Male 42.8
Entorhinal cortex
nTPM: 39.7
Samples: 4

Max nTPM: 42.4
Min nTPM: 37.4
Sample A Female 37.4
Sample B Female 42.4
Sample C Male 39.1
Sample D Male 40.0
Ventral hippocampus
nTPM: 38.7
Samples: 4

Max nTPM: 42.2
Min nTPM: 34.0
Sample A Female 39.8
Sample B Female 38.7
Sample C Male 34.0
Sample D Male 42.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 14.0
Min nTPM: 11.5
Sample A Male 11.5
Sample B Male 12.4
Sample C Female 14.0
Sample D Female 14.0
Hippocampal formation
nTPM: 14.0
Samples: 4

Max nTPM: 15.8
Min nTPM: 12.5
Sample A Male 13.7
Sample B Male 12.5
Sample C Female 15.8
Sample D Female 13.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
532600 Antisense, RP_040810_02_E01, Mouse strain C57BL/6J (56 days, male) 3.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org