HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:69.8 nTPM
HPA Brain:169.5 nTPM
GTEx:69.8 nTPM
FANTOM5:53.2 Scaled Tags Per Million
Pig:108.1 nTPM
Mouse:143.2 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003015Antibody CAB011676
Glial cells Not detectedMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 169.5
Sample id Sample description nTPM
Hippocampus
nTPM: 136.7
1898 Male, age 80, left hemisphere 175.4
1855 Male, age 76, left hemisphere 141.7
1911 Female, age 85, right hemisphere 130.8
2621 Female, age 67, right hemisphere 130.7
2148 Female, age 91, left hemisphere 124.9
2529 Female, age 94, left hemisphere 117.0
Dentate gyrus
nTPM: 126.4
2010 Male, age 76, both hemispheres 183.4
1927 Female, age 91, both hemispheres 142.4
2528 Male, age 74, both hemispheres 123.3
2530 Female, age 94, left hemisphere 109.8
2246 Female, age 85, both hemispheres 109.6
2531 Female, age 67, both hemispheres 90.2
Entorhinal gyrus
nTPM: 107.6
2764 Male, age 80, right hemisphere 127.1
1938 Female, age 85, left hemisphere 126.8
2613 Female, age 94, left hemisphere 104.8
2117 Female, age 91, right hemisphere 99.6
1787 Male, age 76, left hemisphere 99.4
2686 Male, age 75, right hemisphere 87.8
Hippocampus, CA1
nTPM: 169.5
2749 Male, age 80, left hemisphere 244.5
2527 Male, age 74, both hemispheres 172.4
1873 Female, age 85, both hemispheres 159.9
2045 Male, age 76, both hemispheres 150.0
2082 Female, age 91, right hemisphere 120.7
Hippocampus, CA2
nTPM: 133.9
1963 Male, age 80, left hemisphere 163.1
2249 Male, age 74, both hemispheres 162.8
1892 Male, age 76, both hemispheres 154.1
2113 Female, age 91, right hemisphere 118.3
1940 Female, age 85, left hemisphere 105.0
2437 Female, age 94, left hemisphere 99.8
Hippocampus, CA3
nTPM: 131.4
2137 Male, age 80, left hemisphere 168.9
1867 Male, age 76, both hemispheres 153.7
2436 Male, age 74, both hemispheres 139.4
1891 Female, age 85, both hemispheres 125.1
2620 Female, age 94, left hemisphere 101.8
2861 Female, age 67, both hemispheres 99.4
Parahippocampal cortex
nTPM: 118.9
2018 Male, age 76, both hemispheres 160.6
1850 Male, age 80, both hemispheres 138.3
2250 Female, age 67, right hemisphere 127.7
1933 Female, age 85, both hemispheres 119.8
2245 Female, age 91, both hemispheres 115.4
1990 Female, age 91, right hemisphere 114.8
2532 Female, age 72, left hemisphere 111.7
2692 Male, age 74, both hemispheres 107.9
2622 Female, age 67, right hemisphere 97.7
2693 Female, age 94, both hemispheres 94.8
Perirhinal gyrus
nTPM: 121.9
1847 Female, age 91, left hemisphere 149.9
1841 Female, age 85, right hemisphere 135.9
1794 Male, age 80, right hemisphere 132.1
2521 Female, age 94, right hemisphere 108.8
2848 Male, age 76, right hemisphere 82.9
Subiculum
nTPM: 117.9
1901 Male, age 80, both hemispheres 138.6
2619 Male, age 74, both hemispheres 125.6
1977 Female, age 85, both hemispheres 121.7
2042 Male, age 76, both hemispheres 117.8
2438 Female, age 94, left hemisphere 104.8
2729 Female, age 91, right hemisphere 98.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.8
Samples: 197

Max nTPM: 171.6
Min nTPM: 26.6
Std nTPM: 20.7
Median nTPM: 67.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 171.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 146.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 128.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 122.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 111.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 108.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 105.6
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 105.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 103.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 103.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 102.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.2
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 48.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 108.1
Pig sample Sample description nTPM
Subiculum
nTPM: 92.8
Samples: 4

Max nTPM: 120.1
Min nTPM: 76.5
Sample A Female 120.1
Sample B Female 90.4
Sample C Male 84.3
Sample D Male 76.5
Dorsal hippocampus
nTPM: 100.7
Samples: 4

Max nTPM: 138.3
Min nTPM: 71.2
Sample A Female 138.3
Sample B Female 102.6
Sample C Male 90.7
Sample D Male 71.2
Entorhinal cortex
nTPM: 103.3
Samples: 4

Max nTPM: 115.3
Min nTPM: 85.0
Sample A Female 99.4
Sample B Female 115.3
Sample C Male 113.3
Sample D Male 85.0
Ventral hippocampus
nTPM: 108.1
Samples: 4

Max nTPM: 133.8
Min nTPM: 85.5
Sample A Female 117.6
Sample B Female 85.5
Sample C Male 133.8
Sample D Male 95.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 143.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 143.2
Samples: 4

Max nTPM: 155.5
Min nTPM: 132.5
Sample A Male 142.4
Sample B Male 155.5
Sample C Female 142.4
Sample D Female 132.5
Hippocampal formation
nTPM: 135.4
Samples: 4

Max nTPM: 165.9
Min nTPM: 118.5
Sample A Male 165.9
Sample B Male 118.5
Sample C Female 129.7
Sample D Female 127.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
75077193 Antisense, RP_060412_02_E05, Mouse strain C57BL/6J (56 days, male) 15.4
68745353 Antisense, RP_050210_01_G07, Mouse strain C57BL/6J (56 days, male) 7.4

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