HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:32.9 nTPM
HPA Brain:16.3 nTPM
GTEx:32.9 nTPM
FANTOM5:23.4 Scaled Tags Per Million
Pig:20.8 nTPM
Mouse:25.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008507
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.3
Sample id Sample description nTPM
Hippocampus
nTPM: 14.2
1898 Male, age 80, left hemisphere 19.1
2621 Female, age 67, right hemisphere 15.0
1855 Male, age 76, left hemisphere 13.9
2529 Female, age 94, left hemisphere 13.4
1911 Female, age 85, right hemisphere 12.0
2148 Female, age 91, left hemisphere 11.6
Dentate gyrus
nTPM: 13.6
2530 Female, age 94, left hemisphere 15.3
2010 Male, age 76, both hemispheres 15.0
1927 Female, age 91, both hemispheres 13.1
2531 Female, age 67, both hemispheres 13.0
2246 Female, age 85, both hemispheres 12.7
2528 Male, age 74, both hemispheres 12.7
Entorhinal gyrus
nTPM: 14.2
2613 Female, age 94, left hemisphere 16.8
1938 Female, age 85, left hemisphere 14.7
2117 Female, age 91, right hemisphere 14.3
1787 Male, age 76, left hemisphere 14.1
2764 Male, age 80, right hemisphere 13.5
2686 Male, age 75, right hemisphere 11.9
Hippocampus, CA1
nTPM: 14.5
2749 Male, age 80, left hemisphere 18.3
2527 Male, age 74, both hemispheres 15.7
1873 Female, age 85, both hemispheres 14.7
2082 Female, age 91, right hemisphere 13.2
2045 Male, age 76, both hemispheres 10.7
Hippocampus, CA2
nTPM: 14.7
1892 Male, age 76, both hemispheres 16.9
1963 Male, age 80, left hemisphere 15.5
2249 Male, age 74, both hemispheres 14.5
1940 Female, age 85, left hemisphere 13.9
2113 Female, age 91, right hemisphere 13.8
2437 Female, age 94, left hemisphere 13.5
Hippocampus, CA3
nTPM: 14.1
1891 Female, age 85, both hemispheres 16.1
2137 Male, age 80, left hemisphere 15.6
1867 Male, age 76, both hemispheres 14.8
2436 Male, age 74, both hemispheres 14.2
2620 Female, age 94, left hemisphere 13.4
2861 Female, age 67, both hemispheres 10.7
Parahippocampal cortex
nTPM: 14.4
1850 Male, age 80, both hemispheres 17.8
2018 Male, age 76, both hemispheres 16.2
2245 Female, age 91, both hemispheres 15.2
2693 Female, age 94, both hemispheres 14.7
1990 Female, age 91, right hemisphere 14.0
2250 Female, age 67, right hemisphere 14.0
1933 Female, age 85, both hemispheres 13.7
2532 Female, age 72, left hemisphere 13.2
2622 Female, age 67, right hemisphere 12.6
2692 Male, age 74, both hemispheres 12.6
Perirhinal gyrus
nTPM: 16.3
1847 Female, age 91, left hemisphere 18.4
1794 Male, age 80, right hemisphere 16.7
2521 Female, age 94, right hemisphere 16.6
1841 Female, age 85, right hemisphere 16.3
2848 Male, age 76, right hemisphere 13.5
Subiculum
nTPM: 14.5
2619 Male, age 74, both hemispheres 16.4
2438 Female, age 94, left hemisphere 16.1
1901 Male, age 80, both hemispheres 15.7
1977 Female, age 85, both hemispheres 14.0
2042 Male, age 76, both hemispheres 13.9
2729 Female, age 91, right hemisphere 10.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.9
Samples: 197

Max nTPM: 79.9
Min nTPM: 18.1
Std nTPM: 8.6
Median nTPM: 31.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 66.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 62.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 57.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 55.7
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 54.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 52.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 52.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 51.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 51.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 50.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.4
FF:10153-102I9 76 years, female 26.1
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.8
Pig sample Sample description nTPM
Subiculum
nTPM: 17.9
Samples: 4

Max nTPM: 22.6
Min nTPM: 15.9
Sample A Female 22.6
Sample B Female 16.8
Sample C Male 15.9
Sample D Male 16.3
Dorsal hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 24.0
Min nTPM: 15.4
Sample A Female 24.0
Sample B Female 20.3
Sample C Male 23.5
Sample D Male 15.4
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 21.1
Min nTPM: 13.8
Sample A Female 15.1
Sample B Female 21.1
Sample C Male 19.4
Sample D Male 13.8
Ventral hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 19.8
Min nTPM: 14.7
Sample A Female 16.9
Sample B Female 14.7
Sample C Male 19.8
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 26.1
Min nTPM: 24.0
Sample A Male 24.6
Sample B Male 24.0
Sample C Female 25.8
Sample D Female 26.1
Hippocampal formation
nTPM: 23.5
Samples: 4

Max nTPM: 28.3
Min nTPM: 21.2
Sample A Male 28.3
Sample B Male 22.9
Sample C Female 21.7
Sample D Female 21.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
632512 Antisense, RP_040907_01_G01, Mouse strain C57BL/6J (56 days, male) 0.0

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