HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:30.3 nTPM
HPA Brain:41.4 nTPM
GTEx:30.3 nTPM
FANTOM5:47.7 Scaled Tags Per Million
Pig:96.0 nTPM
Mouse:99.0 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049270
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.4
Sample id Sample description nTPM
Hippocampus
nTPM: 38.7
1898 Male, age 80, left hemisphere 50.1
1855 Male, age 76, left hemisphere 46.7
2529 Female, age 94, left hemisphere 38.1
1911 Female, age 85, right hemisphere 36.4
2621 Female, age 67, right hemisphere 33.8
2148 Female, age 91, left hemisphere 27.1
Dentate gyrus
nTPM: 34.8
1927 Female, age 91, both hemispheres 44.9
2010 Male, age 76, both hemispheres 42.7
2530 Female, age 94, left hemisphere 42.0
2246 Female, age 85, both hemispheres 34.5
2531 Female, age 67, both hemispheres 24.9
2528 Male, age 74, both hemispheres 20.1
Entorhinal gyrus
nTPM: 34.8
1938 Female, age 85, left hemisphere 43.9
1787 Male, age 76, left hemisphere 40.5
2764 Male, age 80, right hemisphere 35.7
2613 Female, age 94, left hemisphere 34.2
2686 Male, age 75, right hemisphere 29.6
2117 Female, age 91, right hemisphere 25.0
Hippocampus, CA1
nTPM: 41.4
2749 Male, age 80, left hemisphere 73.8
1873 Female, age 85, both hemispheres 39.0
2045 Male, age 76, both hemispheres 33.8
2527 Male, age 74, both hemispheres 32.7
2082 Female, age 91, right hemisphere 27.8
Hippocampus, CA2
nTPM: 40.4
1892 Male, age 76, both hemispheres 66.2
1963 Male, age 80, left hemisphere 47.2
2249 Male, age 74, both hemispheres 36.4
1940 Female, age 85, left hemisphere 33.6
2437 Female, age 94, left hemisphere 33.3
2113 Female, age 91, right hemisphere 25.9
Hippocampus, CA3
nTPM: 37.9
2137 Male, age 80, left hemisphere 65.2
1867 Male, age 76, both hemispheres 51.8
1891 Female, age 85, both hemispheres 35.6
2436 Male, age 74, both hemispheres 32.5
2861 Female, age 67, both hemispheres 22.7
2620 Female, age 94, left hemisphere 19.9
Parahippocampal cortex
nTPM: 36.1
1850 Male, age 80, both hemispheres 43.1
2018 Male, age 76, both hemispheres 43.0
2245 Female, age 91, both hemispheres 42.0
1933 Female, age 85, both hemispheres 39.9
2532 Female, age 72, left hemisphere 37.5
1990 Female, age 91, right hemisphere 37.1
2250 Female, age 67, right hemisphere 36.0
2693 Female, age 94, both hemispheres 32.0
2692 Male, age 74, both hemispheres 28.5
2622 Female, age 67, right hemisphere 21.9
Perirhinal gyrus
nTPM: 40.1
1847 Female, age 91, left hemisphere 47.3
1841 Female, age 85, right hemisphere 43.8
2848 Male, age 76, right hemisphere 37.0
1794 Male, age 80, right hemisphere 36.5
2521 Female, age 94, right hemisphere 35.5
Subiculum
nTPM: 36.1
1901 Male, age 80, both hemispheres 48.3
2438 Female, age 94, left hemisphere 46.1
2042 Male, age 76, both hemispheres 41.2
1977 Female, age 85, both hemispheres 35.7
2619 Male, age 74, both hemispheres 23.0
2729 Female, age 91, right hemisphere 22.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.3
Samples: 197

Max nTPM: 66.7
Min nTPM: 12.0
Std nTPM: 9.2
Median nTPM: 29.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 66.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 60.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 55.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 54.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 52.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 50.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 49.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 49.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 48.8
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 46.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.7
FF:10169-103B7 60 years, female 47.7
FF:10153-102I9 76 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 96.0
Pig sample Sample description nTPM
Subiculum
nTPM: 86.6
Samples: 4

Max nTPM: 103.3
Min nTPM: 78.6
Sample A Female 103.3
Sample B Female 78.6
Sample C Male 79.4
Sample D Male 84.9
Dorsal hippocampus
nTPM: 75.1
Samples: 4

Max nTPM: 90.6
Min nTPM: 60.2
Sample A Female 83.9
Sample B Female 65.7
Sample C Male 90.6
Sample D Male 60.2
Entorhinal cortex
nTPM: 96.0
Samples: 4

Max nTPM: 101.1
Min nTPM: 90.8
Sample A Female 90.8
Sample B Female 100.8
Sample C Male 101.1
Sample D Male 91.1
Ventral hippocampus
nTPM: 62.0
Samples: 4

Max nTPM: 69.9
Min nTPM: 54.6
Sample A Female 62.4
Sample B Female 61.2
Sample C Male 54.6
Sample D Male 69.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.1
Samples: 4

Max nTPM: 100.3
Min nTPM: 84.7
Sample A Male 84.7
Sample B Male 100.3
Sample C Female 96.8
Sample D Female 98.7
Hippocampal formation
nTPM: 99.0
Samples: 4

Max nTPM: 114.3
Min nTPM: 92.7
Sample A Male 114.3
Sample B Male 94.4
Sample C Female 94.5
Sample D Female 92.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
73512483 Antisense, RP_051017_02_D02, Mouse strain C57BL/6J (56 days, male) 4.6
68301270 Antisense, RP_041129_02_H11, Mouse strain C57BL/6J (56 days, male) 4.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org