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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
29.2
nTPM
HPA Brain:
40.8
nTPM
GTEx:
29.2
nTPM
FANTOM5:
27.2
Scaled Tags Per Million
Pig:
12.6
nTPM
Mouse:
8.2
nTPM
Allen mouse:
11.3
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
40.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 35.7
2586
Male, age 75, left hemisphere
49.9
2411
Female, age 72, unknown
36.1
2666
Male, age 74, left hemisphere
36.0
1870
Female, age 42, unknown
35.8
2828
Female, age 72, unknown
35.7
1827
Male, age 72, unknown
35.6
2019
Male, age 18, unknown
34.6
1833
Male, age 53, unknown
31.9
1830
Male, age 51, unknown
31.3
2219
Male, age 76, both hemispheres
30.2
Dorsal raphe nucleus nTPM: 37.2
2298
Female, age 72, unknown
43.4
2047
Male, age 72, unknown
40.0
2016
Female, age 72, unknown
34.9
1828
Male, age 53, unknown
34.8
2750
Male, age 76, both hemispheres
32.6
Inferior colliculus nTPM: 31.3
2097
Female, age 72, unknown
33.5
1848
Female, age 42, unknown
31.0
1890
Male, age 53, unknown
31.0
2849
Male, age 72, unknown
29.6
Median raphe nucleus nTPM: 32.7
2220
Male, age 76, midline
32.7
Periaquaductal grey, anterior nTPM: 40.8
1947
Male, age 18, unknown
42.7
1795
Male, age 51, unknown
41.8
2502
Female, age 75, unknown
37.9
Periaquaductal grey, dorsal nTPM: 32.6
1840
Male, age 53, unknown
37.2
1831
Male, age 72, unknown
32.6
2464
Female, age 72, unknown
30.9
2850
Male, age 76, both hemispheres
29.5
Periaquaductal grey, lateral nTPM: 34.0
2272
Male, age 74, both hemispheres
36.6
2140
Male, age 76, both hemispheres
33.0
2053
Male, age 18, unknown
32.5
Pretectal area nTPM: 33.8
1816
Male, age 51, unknown
36.9
2407
Male, age 75, both hemispheres
36.0
2273
Male, age 74, both hemispheres
35.8
2007
Male, age 72, unknown
34.9
1817
Female, age 42, unknown
34.1
2224
Female, age 72, unknown
33.4
2825
Male, age 18, unknown
33.0
1815
Male, age 53, unknown
32.5
1944
Female, age 72, unknown
32.3
2667
Female, age 75, unknown
31.6
2316
Male, age 76, right hemisphere
30.8
Red nucleus nTPM: 34.4
2584
Male, age 75, left hemisphere
38.5
1821
Female, age 72, unknown
37.2
2769
Male, age 72, unknown
35.6
2725
Female, age 75, unknown
35.5
2227
Male, age 72, unknown
35.4
2588
Male, age 74, left hemisphere
35.2
2785
Male, age 18, unknown
34.7
1954
Female, age 42, unknown
34.0
2503
Female, age 72, unknown
33.6
1904
Male, age 53, unknown
33.3
1865
Male, age 51, unknown
33.0
2823
Male, age 76, right hemisphere
27.1
Substantia nigra nTPM: 39.9
2409
Female, age 72, unknown
46.9
1916
Female, age 42, unknown
45.1
1851
Male, age 51, unknown
43.1
1941
Male, age 53, unknown
41.1
2583
Male, age 75, right hemisphere
40.5
2590
Female, age 75, unknown
38.5
2699
Male, age 18, unknown
38.2
2241
Male, age 72, unknown
36.0
1889
Female, age 72, unknown
35.2
2665
Male, age 74, both hemispheres
34.0
Superior colliculus nTPM: 34.9
2664
Male, age 75, both hemispheres
45.4
2668
Female, age 75, unknown
39.3
1796
Male, age 53, unknown
38.5
2261
Male, age 18, unknown
37.0
1913
Female, age 42, unknown
35.8
2087
Female, age 72, unknown
34.1
1995
Male, age 72, unknown
33.0
1839
Male, age 51, unknown
31.0
2587
Male, age 74, left hemisphere
29.0
1895
Male, age 76, right hemisphere
25.5
Ventral tegmental area nTPM: 39.0
2410
Female, age 72, unknown
42.8
1942
Male, age 51, unknown
41.6
1915
Female, age 42, unknown
40.9
2021
Male, age 53, unknown
37.1
2223
Female, age 72, unknown
36.7
2218
Male, age 76, both hemispheres
35.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
29.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 29.2
Samples: 139
Max nTPM: 49.3
Min nTPM: 18.6
Std nTPM: 5.0
Median nTPM: 28.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
49.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
44.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
41.3
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
40.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
40.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
40.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
39.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
38.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
37.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
37.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
36.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
36.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
35.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
34.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
34.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
34.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
34.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
34.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
34.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
34.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
34.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
34.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
34.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
34.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
34.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
33.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
33.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
33.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
32.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
32.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
32.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
32.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
32.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
32.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
32.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
32.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
32.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
31.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
31.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
31.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
31.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
31.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
31.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
31.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
31.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
30.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
30.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
30.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
30.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
30.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
30.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
30.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
30.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
30.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
29.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
29.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
29.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
29.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
29.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
29.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
29.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
29.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
29.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
29.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
28.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
28.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
28.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
28.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
28.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
28.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
28.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
28.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
28.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
28.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
28.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
28.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
28.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
28.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
27.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
27.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
27.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
27.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
27.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
27.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
27.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
27.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
27.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
27.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
27.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
26.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
26.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
26.6
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
26.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
26.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
26.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
26.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
26.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
26.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
26.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
26.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
26.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
26.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
26.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
26.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
26.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
25.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
25.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
25.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
25.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
25.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
25.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
25.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
25.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
25.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
24.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
24.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
24.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
24.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
24.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
24.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
23.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
23.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
23.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
23.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
23.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
23.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
23.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
23.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
23.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
23.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
22.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
21.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
21.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
21.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
21.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
20.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
20.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
20.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
18.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
8.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 8.3
Samples: 4
Max nTPM: 10.1
Min nTPM: 7.6
Sample A
Male
7.6
Sample B
Male
7.6
Sample C
Female
10.1
Sample D
Female
7.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.