HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:484.0 nTPM
HPA Brain:597.6 nTPM
GTEx:484.0 nTPM
FANTOM5:306.7 Scaled Tags Per Million
Pig:539.2 nTPM
Mouse:480.4 nTPM
Allen mouse:20.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016669
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 597.6
Sample id Sample description nTPM
Hippocampus
nTPM: 538.8
2621 Female, age 67, right hemisphere 698.2
1911 Female, age 85, right hemisphere 612.1
2529 Female, age 94, left hemisphere 510.9
1855 Male, age 76, left hemisphere 493.4
2148 Female, age 91, left hemisphere 482.2
1898 Male, age 80, left hemisphere 435.8
Dentate gyrus
nTPM: 465.2
2531 Female, age 67, both hemispheres 638.9
1927 Female, age 91, both hemispheres 509.0
2010 Male, age 76, both hemispheres 445.7
2530 Female, age 94, left hemisphere 438.3
2246 Female, age 85, both hemispheres 431.6
2528 Male, age 74, both hemispheres 327.4
Entorhinal gyrus
nTPM: 426.9
2613 Female, age 94, left hemisphere 615.5
2764 Male, age 80, right hemisphere 521.0
1787 Male, age 76, left hemisphere 393.9
1938 Female, age 85, left hemisphere 384.3
2686 Male, age 75, right hemisphere 346.5
2117 Female, age 91, right hemisphere 300.0
Hippocampus, CA1
nTPM: 597.6
2749 Male, age 80, left hemisphere 1021.9
2045 Male, age 76, both hemispheres 555.8
2527 Male, age 74, both hemispheres 529.6
2082 Female, age 91, right hemisphere 508.5
1873 Female, age 85, both hemispheres 372.4
Hippocampus, CA2
nTPM: 442.2
2113 Female, age 91, right hemisphere 593.8
2249 Male, age 74, both hemispheres 486.7
1940 Female, age 85, left hemisphere 445.7
1892 Male, age 76, both hemispheres 438.3
1963 Male, age 80, left hemisphere 370.2
2437 Female, age 94, left hemisphere 318.1
Hippocampus, CA3
nTPM: 596.2
2137 Male, age 80, left hemisphere 1083.0
2861 Female, age 67, both hemispheres 794.2
2620 Female, age 94, left hemisphere 568.3
1867 Male, age 76, both hemispheres 504.1
2436 Male, age 74, both hemispheres 348.7
1891 Female, age 85, both hemispheres 279.2
Parahippocampal cortex
nTPM: 464.7
2245 Female, age 91, both hemispheres 942.0
2622 Female, age 67, right hemisphere 541.3
2018 Male, age 76, both hemispheres 518.4
2532 Female, age 72, left hemisphere 480.4
2250 Female, age 67, right hemisphere 455.8
1933 Female, age 85, both hemispheres 410.6
1850 Male, age 80, both hemispheres 357.4
2693 Female, age 94, both hemispheres 355.0
2692 Male, age 74, both hemispheres 304.0
1990 Female, age 91, right hemisphere 282.5
Perirhinal gyrus
nTPM: 444.1
1847 Female, age 91, left hemisphere 484.9
2521 Female, age 94, right hemisphere 466.1
1794 Male, age 80, right hemisphere 459.1
2848 Male, age 76, right hemisphere 431.5
1841 Female, age 85, right hemisphere 378.8
Subiculum
nTPM: 392.4
2042 Male, age 76, both hemispheres 546.0
1901 Male, age 80, both hemispheres 506.1
2729 Female, age 91, right hemisphere 384.8
1977 Female, age 85, both hemispheres 369.4
2619 Male, age 74, both hemispheres 307.2
2438 Female, age 94, left hemisphere 241.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 484.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 484.0
Samples: 197

Max nTPM: 1968.1
Min nTPM: 27.2
Std nTPM: 338.5
Median nTPM: 388.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1968.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1688.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 1654.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1495.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1442.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1341.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 1340.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 1305.8
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 1298.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 1229.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1222.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 306.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 306.7
FF:10169-103B7 60 years, female 381.1
FF:10153-102I9 76 years, female 232.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 539.2
Pig sample Sample description nTPM
Subiculum
nTPM: 357.7
Samples: 4

Max nTPM: 441.6
Min nTPM: 292.7
Sample A Female 441.6
Sample B Female 292.7
Sample C Male 343.7
Sample D Male 352.8
Dorsal hippocampus
nTPM: 392.1
Samples: 4

Max nTPM: 562.5
Min nTPM: 266.8
Sample A Female 562.5
Sample B Female 406.6
Sample C Male 332.6
Sample D Male 266.8
Entorhinal cortex
nTPM: 539.2
Samples: 4

Max nTPM: 703.6
Min nTPM: 392.7
Sample A Female 592.0
Sample B Female 392.7
Sample C Male 703.6
Sample D Male 468.4
Ventral hippocampus
nTPM: 363.7
Samples: 4

Max nTPM: 606.4
Min nTPM: 220.1
Sample A Female 220.1
Sample B Female 251.0
Sample C Male 377.3
Sample D Male 606.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 480.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 480.4
Samples: 4

Max nTPM: 512.9
Min nTPM: 461.6
Sample A Male 461.6
Sample B Male 481.4
Sample C Female 465.6
Sample D Female 512.9
Hippocampal formation
nTPM: 415.9
Samples: 4

Max nTPM: 484.7
Min nTPM: 389.7
Sample A Male 484.7
Sample B Male 394.1
Sample C Female 389.7
Sample D Female 395.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.6
74586669 Antisense, RP_051214_01_B09, Mouse strain C57BL/6J (56 days, male) 22.3
69015811 Antisense, RP_050315_01_G04, Mouse strain C57BL/6J (56 days, male) 18.8

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