HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:63.2 nTPM
HPA Brain:60.6 nTPM
GTEx:63.2 nTPM
FANTOM5:141.2 Scaled Tags Per Million
Pig:88.7 nTPM
Mouse:58.4 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065599
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.6
Sample id Sample description nTPM
Hippocampus
nTPM: 50.0
1898 Male, age 80, left hemisphere 59.6
2621 Female, age 67, right hemisphere 56.1
1855 Male, age 76, left hemisphere 51.1
2529 Female, age 94, left hemisphere 50.9
2148 Female, age 91, left hemisphere 41.3
1911 Female, age 85, right hemisphere 41.2
Dentate gyrus
nTPM: 47.9
2530 Female, age 94, left hemisphere 67.7
2246 Female, age 85, both hemispheres 51.9
2010 Male, age 76, both hemispheres 47.0
2531 Female, age 67, both hemispheres 43.8
1927 Female, age 91, both hemispheres 43.2
2528 Male, age 74, both hemispheres 33.6
Entorhinal gyrus
nTPM: 53.7
1938 Female, age 85, left hemisphere 58.7
2764 Male, age 80, right hemisphere 58.4
1787 Male, age 76, left hemisphere 56.1
2117 Female, age 91, right hemisphere 53.8
2613 Female, age 94, left hemisphere 51.9
2686 Male, age 75, right hemisphere 43.3
Hippocampus, CA1
nTPM: 49.5
2749 Male, age 80, left hemisphere 63.1
2527 Male, age 74, both hemispheres 50.6
1873 Female, age 85, both hemispheres 45.7
2082 Female, age 91, right hemisphere 45.7
2045 Male, age 76, both hemispheres 42.6
Hippocampus, CA2
nTPM: 49.1
1892 Male, age 76, both hemispheres 57.4
2437 Female, age 94, left hemisphere 54.8
1940 Female, age 85, left hemisphere 49.9
1963 Male, age 80, left hemisphere 47.2
2113 Female, age 91, right hemisphere 45.2
2249 Male, age 74, both hemispheres 40.4
Hippocampus, CA3
nTPM: 50.4
2137 Male, age 80, left hemisphere 64.0
1867 Male, age 76, both hemispheres 49.9
2861 Female, age 67, both hemispheres 49.8
1891 Female, age 85, both hemispheres 49.2
2436 Male, age 74, both hemispheres 45.8
2620 Female, age 94, left hemisphere 43.7
Parahippocampal cortex
nTPM: 55.0
2245 Female, age 91, both hemispheres 66.1
2532 Female, age 72, left hemisphere 63.8
1850 Male, age 80, both hemispheres 59.6
1933 Female, age 85, both hemispheres 58.2
2250 Female, age 67, right hemisphere 54.3
1990 Female, age 91, right hemisphere 53.0
2693 Female, age 94, both hemispheres 50.4
2018 Male, age 76, both hemispheres 49.6
2622 Female, age 67, right hemisphere 48.9
2692 Male, age 74, both hemispheres 45.8
Perirhinal gyrus
nTPM: 60.6
1794 Male, age 80, right hemisphere 68.2
1841 Female, age 85, right hemisphere 61.2
2521 Female, age 94, right hemisphere 60.1
1847 Female, age 91, left hemisphere 57.8
2848 Male, age 76, right hemisphere 55.4
Subiculum
nTPM: 52.0
2438 Female, age 94, left hemisphere 66.2
1901 Male, age 80, both hemispheres 60.5
1977 Female, age 85, both hemispheres 55.3
2042 Male, age 76, both hemispheres 48.6
2619 Male, age 74, both hemispheres 47.5
2729 Female, age 91, right hemisphere 33.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.2
Samples: 197

Max nTPM: 118.1
Min nTPM: 41.7
Std nTPM: 12.6
Median nTPM: 62.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 118.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 106.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 105.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 99.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 94.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 91.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 89.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 88.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 88.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 87.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 87.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 141.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.2
FF:10169-103B7 60 years, female 142.2
FF:10153-102I9 76 years, female 140.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 88.7
Pig sample Sample description nTPM
Subiculum
nTPM: 83.0
Samples: 4

Max nTPM: 106.6
Min nTPM: 69.8
Sample A Female 106.6
Sample B Female 74.1
Sample C Male 81.5
Sample D Male 69.8
Dorsal hippocampus
nTPM: 88.7
Samples: 4

Max nTPM: 108.9
Min nTPM: 74.5
Sample A Female 108.9
Sample B Female 81.6
Sample C Male 89.8
Sample D Male 74.5
Entorhinal cortex
nTPM: 81.3
Samples: 4

Max nTPM: 98.6
Min nTPM: 74.9
Sample A Female 98.6
Sample B Female 75.1
Sample C Male 74.9
Sample D Male 76.7
Ventral hippocampus
nTPM: 82.4
Samples: 4

Max nTPM: 98.9
Min nTPM: 57.6
Sample A Female 76.7
Sample B Female 57.6
Sample C Male 98.9
Sample D Male 96.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.4
Samples: 4

Max nTPM: 62.3
Min nTPM: 55.9
Sample A Male 62.3
Sample B Male 58.4
Sample C Female 55.9
Sample D Female 57.0
Hippocampal formation
nTPM: 55.9
Samples: 4

Max nTPM: 57.6
Min nTPM: 52.5
Sample A Male 56.9
Sample B Male 52.5
Sample C Female 56.7
Sample D Female 57.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
71992007 Antisense, RP_051012_03_H10, Mouse strain C57BL/6J (56 days, male) 2.0

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