HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.0 nTPM
HPA Brain:29.3 nTPM
GTEx:13.0 nTPM
FANTOM5:7.4 Scaled Tags Per Million
Pig:33.1 nTPM
Mouse:71.0 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015919
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.3
Sample id Sample description nTPM
Hippocampus
nTPM: 25.1
1855 Male, age 76, left hemisphere 29.3
2529 Female, age 94, left hemisphere 27.7
2148 Female, age 91, left hemisphere 26.4
1898 Male, age 80, left hemisphere 23.6
1911 Female, age 85, right hemisphere 22.8
2621 Female, age 67, right hemisphere 20.9
Dentate gyrus
nTPM: 24.8
2530 Female, age 94, left hemisphere 30.1
2531 Female, age 67, both hemispheres 29.1
2010 Male, age 76, both hemispheres 27.6
2528 Male, age 74, both hemispheres 24.4
2246 Female, age 85, both hemispheres 20.1
1927 Female, age 91, both hemispheres 17.3
Entorhinal gyrus
nTPM: 26.2
2117 Female, age 91, right hemisphere 35.6
2686 Male, age 75, right hemisphere 30.2
1938 Female, age 85, left hemisphere 26.1
2764 Male, age 80, right hemisphere 25.3
2613 Female, age 94, left hemisphere 20.4
1787 Male, age 76, left hemisphere 19.2
Hippocampus, CA1
nTPM: 29.3
2045 Male, age 76, both hemispheres 56.7
2082 Female, age 91, right hemisphere 30.0
2527 Male, age 74, both hemispheres 22.9
1873 Female, age 85, both hemispheres 21.7
2749 Male, age 80, left hemisphere 15.1
Hippocampus, CA2
nTPM: 23.0
2437 Female, age 94, left hemisphere 32.1
2113 Female, age 91, right hemisphere 25.8
1963 Male, age 80, left hemisphere 25.7
1940 Female, age 85, left hemisphere 19.3
2249 Male, age 74, both hemispheres 18.4
1892 Male, age 76, both hemispheres 16.6
Hippocampus, CA3
nTPM: 20.4
2861 Female, age 67, both hemispheres 32.1
1891 Female, age 85, both hemispheres 25.5
1867 Male, age 76, both hemispheres 19.0
2620 Female, age 94, left hemisphere 18.1
2436 Male, age 74, both hemispheres 15.8
2137 Male, age 80, left hemisphere 11.9
Parahippocampal cortex
nTPM: 21.0
2692 Male, age 74, both hemispheres 24.1
2018 Male, age 76, both hemispheres 23.9
2693 Female, age 94, both hemispheres 23.7
1933 Female, age 85, both hemispheres 22.1
2250 Female, age 67, right hemisphere 20.1
2245 Female, age 91, both hemispheres 19.8
1990 Female, age 91, right hemisphere 19.5
2532 Female, age 72, left hemisphere 19.4
2622 Female, age 67, right hemisphere 18.8
1850 Male, age 80, both hemispheres 18.3
Perirhinal gyrus
nTPM: 20.8
2521 Female, age 94, right hemisphere 22.3
1847 Female, age 91, left hemisphere 22.2
2848 Male, age 76, right hemisphere 21.4
1794 Male, age 80, right hemisphere 20.4
1841 Female, age 85, right hemisphere 17.9
Subiculum
nTPM: 28.1
2729 Female, age 91, right hemisphere 32.6
2042 Male, age 76, both hemispheres 32.2
1977 Female, age 85, both hemispheres 28.9
2619 Male, age 74, both hemispheres 26.5
1901 Male, age 80, both hemispheres 24.6
2438 Female, age 94, left hemisphere 23.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 29.3
Min nTPM: 2.2
Std nTPM: 5.1
Median nTPM: 12.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 29.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 28.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 26.3
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 25.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 24.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 23.6
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 23.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 23.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 22.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 21.9
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 21.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.4
FF:10153-102I9 76 years, female 9.6
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.1
Pig sample Sample description nTPM
Subiculum
nTPM: 23.1
Samples: 4

Max nTPM: 26.1
Min nTPM: 20.6
Sample A Female 26.1
Sample B Female 24.0
Sample C Male 21.8
Sample D Male 20.6
Dorsal hippocampus
nTPM: 33.1
Samples: 4

Max nTPM: 42.9
Min nTPM: 20.3
Sample A Female 42.9
Sample B Female 29.6
Sample C Male 39.6
Sample D Male 20.3
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 27.3
Min nTPM: 20.2
Sample A Female 21.4
Sample B Female 27.3
Sample C Male 23.6
Sample D Male 20.2
Ventral hippocampus
nTPM: 30.0
Samples: 4

Max nTPM: 36.0
Min nTPM: 23.7
Sample A Female 29.9
Sample B Female 23.7
Sample C Male 36.0
Sample D Male 30.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.9
Samples: 4

Max nTPM: 53.4
Min nTPM: 40.8
Sample A Male 53.4
Sample B Male 42.6
Sample C Female 42.9
Sample D Female 40.8
Hippocampal formation
nTPM: 71.0
Samples: 4

Max nTPM: 87.7
Min nTPM: 54.3
Sample A Male 54.3
Sample B Male 74.5
Sample C Female 87.7
Sample D Female 67.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
68844074 Antisense, RP_050217_02_H01, Mouse strain C57BL/6J (56 days, male) 9.8
77791968 Antisense, RP_070208_04_C01, Mouse strain C57BL/6J (56 days, male) 9.2
71920517 Antisense, RP_051017_02_G10, Mouse strain C57BL/6J (56 days, male) 7.6

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