HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:59.9 nTPM
HPA Brain:179.2 nTPM
GTEx:59.9 nTPM
FANTOM5:78.2 Scaled Tags Per Million
Pig:219.8 nTPM
Mouse:333.7 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074019
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 179.2
Sample id Sample description nTPM
Hippocampus
nTPM: 135.4
1898 Male, age 80, left hemisphere 172.5
2148 Female, age 91, left hemisphere 157.6
2621 Female, age 67, right hemisphere 135.6
1855 Male, age 76, left hemisphere 126.2
1911 Female, age 85, right hemisphere 126.1
2529 Female, age 94, left hemisphere 94.1
Dentate gyrus
nTPM: 134.5
1927 Female, age 91, both hemispheres 201.8
2010 Male, age 76, both hemispheres 150.4
2531 Female, age 67, both hemispheres 135.9
2246 Female, age 85, both hemispheres 131.5
2530 Female, age 94, left hemisphere 94.7
2528 Male, age 74, both hemispheres 92.8
Entorhinal gyrus
nTPM: 100.7
1938 Female, age 85, left hemisphere 134.2
1787 Male, age 76, left hemisphere 118.7
2764 Male, age 80, right hemisphere 113.1
2117 Female, age 91, right hemisphere 83.0
2613 Female, age 94, left hemisphere 80.0
2686 Male, age 75, right hemisphere 74.9
Hippocampus, CA1
nTPM: 179.2
2749 Male, age 80, left hemisphere 358.0
1873 Female, age 85, both hemispheres 182.6
2045 Male, age 76, both hemispheres 147.5
2527 Male, age 74, both hemispheres 106.7
2082 Female, age 91, right hemisphere 101.1
Hippocampus, CA2
nTPM: 136.9
1963 Male, age 80, left hemisphere 221.3
1892 Male, age 76, both hemispheres 198.9
2113 Female, age 91, right hemisphere 109.3
1940 Female, age 85, left hemisphere 108.4
2437 Female, age 94, left hemisphere 95.8
2249 Male, age 74, both hemispheres 87.4
Hippocampus, CA3
nTPM: 157.5
2137 Male, age 80, left hemisphere 298.6
2620 Female, age 94, left hemisphere 153.1
1867 Male, age 76, both hemispheres 144.3
2861 Female, age 67, both hemispheres 143.1
1891 Female, age 85, both hemispheres 117.8
2436 Male, age 74, both hemispheres 88.1
Parahippocampal cortex
nTPM: 109.4
2245 Female, age 91, both hemispheres 140.8
1850 Male, age 80, both hemispheres 126.2
2250 Female, age 67, right hemisphere 123.5
2693 Female, age 94, both hemispheres 120.3
1933 Female, age 85, both hemispheres 109.5
1990 Female, age 91, right hemisphere 105.7
2018 Male, age 76, both hemispheres 104.9
2532 Female, age 72, left hemisphere 99.9
2622 Female, age 67, right hemisphere 90.8
2692 Male, age 74, both hemispheres 72.7
Perirhinal gyrus
nTPM: 132.4
1794 Male, age 80, right hemisphere 149.5
2521 Female, age 94, right hemisphere 140.9
1847 Female, age 91, left hemisphere 139.9
1841 Female, age 85, right hemisphere 125.9
2848 Male, age 76, right hemisphere 106.1
Subiculum
nTPM: 104.9
1901 Male, age 80, both hemispheres 151.2
1977 Female, age 85, both hemispheres 113.9
2729 Female, age 91, right hemisphere 105.3
2042 Male, age 76, both hemispheres 96.9
2438 Female, age 94, left hemisphere 81.9
2619 Male, age 74, both hemispheres 80.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.9
Samples: 197

Max nTPM: 213.4
Min nTPM: 13.7
Std nTPM: 29.5
Median nTPM: 56.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 213.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 146.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 137.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 136.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 134.5
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 118.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 110.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 110.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 107.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 106.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 105.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.2
FF:10169-103B7 60 years, female 84.1
FF:10153-102I9 76 years, female 72.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 219.8
Pig sample Sample description nTPM
Subiculum
nTPM: 130.7
Samples: 4

Max nTPM: 195.7
Min nTPM: 103.8
Sample A Female 195.7
Sample B Female 116.6
Sample C Male 106.5
Sample D Male 103.8
Dorsal hippocampus
nTPM: 219.8
Samples: 4

Max nTPM: 258.8
Min nTPM: 175.1
Sample A Female 258.8
Sample B Female 240.1
Sample C Male 175.1
Sample D Male 205.1
Entorhinal cortex
nTPM: 169.7
Samples: 4

Max nTPM: 197.3
Min nTPM: 151.0
Sample A Female 173.3
Sample B Female 157.0
Sample C Male 197.3
Sample D Male 151.0
Ventral hippocampus
nTPM: 156.4
Samples: 4

Max nTPM: 288.4
Min nTPM: 109.4
Sample A Female 110.1
Sample B Female 117.6
Sample C Male 109.4
Sample D Male 288.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 333.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 217.7
Samples: 4

Max nTPM: 232.9
Min nTPM: 205.8
Sample A Male 232.9
Sample B Male 212.7
Sample C Female 219.5
Sample D Female 205.8
Hippocampal formation
nTPM: 333.7
Samples: 4

Max nTPM: 407.5
Min nTPM: 273.5
Sample A Male 300.0
Sample B Male 353.8
Sample C Female 407.5
Sample D Female 273.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
2742 Antisense, RP_Baylor_103172, Mouse strain C57BL/6J (56 days, male) 1.4
2741 Antisense, RP_Baylor_103172, Mouse strain C57BL/6J (56 days, male) 1.1

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