HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.2 nTPM
HPA Brain:41.9 nTPM
GTEx:24.2 nTPM
FANTOM5:41.7 Scaled Tags Per Million
Pig:36.1 nTPM
Mouse:52.0 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.9
Sample id Sample description nTPM
Hippocampus
nTPM: 37.9
1898 Male, age 80, left hemisphere 42.4
2148 Female, age 91, left hemisphere 39.6
2621 Female, age 67, right hemisphere 38.1
2529 Female, age 94, left hemisphere 36.7
1855 Male, age 76, left hemisphere 35.4
1911 Female, age 85, right hemisphere 35.3
Dentate gyrus
nTPM: 39.1
1927 Female, age 91, both hemispheres 49.1
2010 Male, age 76, both hemispheres 45.3
2530 Female, age 94, left hemisphere 40.7
2528 Male, age 74, both hemispheres 35.2
2246 Female, age 85, both hemispheres 34.6
2531 Female, age 67, both hemispheres 29.7
Entorhinal gyrus
nTPM: 36.6
2764 Male, age 80, right hemisphere 43.9
2117 Female, age 91, right hemisphere 37.3
1938 Female, age 85, left hemisphere 36.9
1787 Male, age 76, left hemisphere 35.1
2613 Female, age 94, left hemisphere 33.5
2686 Male, age 75, right hemisphere 32.9
Hippocampus, CA1
nTPM: 40.6
2749 Male, age 80, left hemisphere 55.1
1873 Female, age 85, both hemispheres 42.5
2045 Male, age 76, both hemispheres 39.6
2527 Male, age 74, both hemispheres 35.0
2082 Female, age 91, right hemisphere 30.9
Hippocampus, CA2
nTPM: 41.9
1963 Male, age 80, left hemisphere 54.4
1892 Male, age 76, both hemispheres 53.9
2249 Male, age 74, both hemispheres 37.7
1940 Female, age 85, left hemisphere 36.6
2437 Female, age 94, left hemisphere 36.0
2113 Female, age 91, right hemisphere 33.0
Hippocampus, CA3
nTPM: 37.3
1867 Male, age 76, both hemispheres 46.9
2137 Male, age 80, left hemisphere 44.0
2436 Male, age 74, both hemispheres 37.4
1891 Female, age 85, both hemispheres 35.4
2861 Female, age 67, both hemispheres 31.6
2620 Female, age 94, left hemisphere 28.7
Parahippocampal cortex
nTPM: 35.6
1850 Male, age 80, both hemispheres 43.3
1990 Female, age 91, right hemisphere 41.1
2018 Male, age 76, both hemispheres 40.5
1933 Female, age 85, both hemispheres 38.8
2532 Female, age 72, left hemisphere 35.9
2245 Female, age 91, both hemispheres 35.1
2622 Female, age 67, right hemisphere 32.6
2692 Male, age 74, both hemispheres 31.0
2250 Female, age 67, right hemisphere 29.4
2693 Female, age 94, both hemispheres 28.9
Perirhinal gyrus
nTPM: 39.3
1847 Female, age 91, left hemisphere 45.8
1794 Male, age 80, right hemisphere 43.6
1841 Female, age 85, right hemisphere 41.1
2848 Male, age 76, right hemisphere 33.5
2521 Female, age 94, right hemisphere 32.3
Subiculum
nTPM: 36.6
1901 Male, age 80, both hemispheres 40.4
1977 Female, age 85, both hemispheres 39.5
2042 Male, age 76, both hemispheres 36.5
2438 Female, age 94, left hemisphere 36.1
2619 Male, age 74, both hemispheres 34.5
2729 Female, age 91, right hemisphere 32.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.2
Samples: 197

Max nTPM: 39.3
Min nTPM: 14.1
Std nTPM: 4.3
Median nTPM: 24.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 39.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 37.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 36.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 33.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 33.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 33.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 32.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 32.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 32.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 31.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 31.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.7
FF:10153-102I9 76 years, female 43.9
FF:10169-103B7 60 years, female 39.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.1
Pig sample Sample description nTPM
Subiculum
nTPM: 32.9
Samples: 4

Max nTPM: 40.7
Min nTPM: 28.6
Sample A Female 40.7
Sample B Female 29.0
Sample C Male 33.1
Sample D Male 28.6
Dorsal hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 47.2
Min nTPM: 26.2
Sample A Female 47.2
Sample B Female 36.3
Sample C Male 34.6
Sample D Male 26.2
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 39.7
Min nTPM: 30.5
Sample A Female 39.7
Sample B Female 32.7
Sample C Male 34.6
Sample D Male 30.5
Ventral hippocampus
nTPM: 35.2
Samples: 4

Max nTPM: 40.5
Min nTPM: 24.5
Sample A Female 37.4
Sample B Female 24.5
Sample C Male 40.5
Sample D Male 38.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.0
Samples: 4

Max nTPM: 58.6
Min nTPM: 47.3
Sample A Male 51.3
Sample B Male 47.3
Sample C Female 50.9
Sample D Female 58.6
Hippocampal formation
nTPM: 50.8
Samples: 4

Max nTPM: 55.4
Min nTPM: 46.6
Sample A Male 51.1
Sample B Male 50.1
Sample C Female 55.4
Sample D Female 46.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
532695 Antisense, RP_040825_01_E06, Mouse strain C57BL/6J (56 days, male) 8.5

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