HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		19.180
RNA expressioni
Consensus:1.9 nTPM
HPA Brain:2.5 nTPM
GTEx:1.9 nTPM
FANTOM5:0.2 Scaled Tags Per Million
Pig:5.0 nTPM
Mouse:0.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061003Antibody CAB002522Antibody CAB072340
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected






HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA013768
Hippocampal formation mean intensity 19.180
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 5.210
Molecular layer of the dentate gyrus 5.434
Granular dentate gyrus 7.906
CA1 - oriens layer 1.514
CA1 - pyramidal layer 3.809
CA1 - radiatum layer 4.500
CA2 - oriens layer 1.878
CA2 - pyramidal layer 4.206
CA2 - radiatum layer 4.304
CA3 - oriens layer 2.391
CA3 - pyramidal layer 4.464
CA3 - radiatum layer 3.521
Stratum lucidum 4.307
Lacunosum moleculare 2.808
Subiculum 19.180

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2.5
Sample id Sample description nTPM
Hippocampus
nTPM: 1.7
1898 Male, age 80, left hemisphere 3.0
2529 Female, age 94, left hemisphere 2.9
2621 Female, age 67, right hemisphere 1.5
2148 Female, age 91, left hemisphere 1.1
1855 Male, age 76, left hemisphere 1.0
1911 Female, age 85, right hemisphere 0.4
Dentate gyrus
nTPM: 2.1
2246 Female, age 85, both hemispheres 4.3
2531 Female, age 67, both hemispheres 3.8
2528 Male, age 74, both hemispheres 2.9
1927 Female, age 91, both hemispheres 1.1
2010 Male, age 76, both hemispheres 0.4
2530 Female, age 94, left hemisphere 0.2
Entorhinal gyrus
nTPM: 0.4
2613 Female, age 94, left hemisphere 1.0
2686 Male, age 75, right hemisphere 0.6
1938 Female, age 85, left hemisphere 0.5
2764 Male, age 80, right hemisphere 0.4
2117 Female, age 91, right hemisphere 0.1
1787 Male, age 76, left hemisphere 0.0
Hippocampus, CA1
nTPM: 0.7
1873 Female, age 85, both hemispheres 1.5
2045 Male, age 76, both hemispheres 0.7
2527 Male, age 74, both hemispheres 0.7
2082 Female, age 91, right hemisphere 0.3
2749 Male, age 80, left hemisphere 0.3
Hippocampus, CA2
nTPM: 1.0
1892 Male, age 76, both hemispheres 3.4
1963 Male, age 80, left hemisphere 1.0
2249 Male, age 74, both hemispheres 0.7
2437 Female, age 94, left hemisphere 0.7
2113 Female, age 91, right hemisphere 0.4
1940 Female, age 85, left hemisphere 0.2
Hippocampus, CA3
nTPM: 2.5
2861 Female, age 67, both hemispheres 4.9
2620 Female, age 94, left hemisphere 3.0
1891 Female, age 85, both hemispheres 2.9
1867 Male, age 76, both hemispheres 2.8
2137 Male, age 80, left hemisphere 1.0
2436 Male, age 74, both hemispheres 0.6
Parahippocampal cortex
nTPM: 1.2
2018 Male, age 76, both hemispheres 5.9
1850 Male, age 80, both hemispheres 1.3
1933 Female, age 85, both hemispheres 1.1
2532 Female, age 72, left hemisphere 1.1
2692 Male, age 74, both hemispheres 0.8
1990 Female, age 91, right hemisphere 0.6
2250 Female, age 67, right hemisphere 0.5
2245 Female, age 91, both hemispheres 0.4
2622 Female, age 67, right hemisphere 0.4
2693 Female, age 94, both hemispheres 0.2
Perirhinal gyrus
nTPM: 0.3
1847 Female, age 91, left hemisphere 0.7
2521 Female, age 94, right hemisphere 0.4
1841 Female, age 85, right hemisphere 0.2
2848 Male, age 76, right hemisphere 0.2
1794 Male, age 80, right hemisphere 0.1
Subiculum
nTPM: 0.9
1901 Male, age 80, both hemispheres 1.8
2729 Female, age 91, right hemisphere 1.7
2619 Male, age 74, both hemispheres 0.9
1977 Female, age 85, both hemispheres 0.6
2438 Female, age 94, left hemisphere 0.2
2042 Male, age 76, both hemispheres 0.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1.9
Samples: 197

Max nTPM: 17.9
Min nTPM: 0.0
Std nTPM: 2.7
Median nTPM: 0.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 17.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 14.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 13.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 13.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 12.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 11.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 9.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 9.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 7.4
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 7.0
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 6.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.2
FF:10153-102I9 76 years, female 0.5
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.0
Pig sample Sample description nTPM
Subiculum
nTPM: 0.4
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.0
Sample A Female 0.7
Sample B Female 0.1
Sample C Male 0.6
Sample D Male 0.0
Dorsal hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.1
Sample C Male 0.2
Sample D Male 0.1
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 11.3
Min nTPM: 0.4
Sample A Female 11.3
Sample B Female 7.7
Sample C Male 0.7
Sample D Male 0.4
Ventral hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.3
Sample D Male 0.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.6
Sample A Male 0.6
Sample B Male 0.8
Sample C Female 1.0
Sample D Female 1.0
Hippocampal formation
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.1
Sample A Male 0.4
Sample B Male 0.6
Sample C Female 0.1
Sample D Female 0.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
1058 Antisense, RP_Baylor_103073, Mouse strain C57BL/6J (56 days, male) 0.2
1056 Antisense, RP_Baylor_103073, Mouse strain C57BL/6J (56 days, male) 0.1

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