HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:1038.1 nTPM
HPA Brain:618.5 nTPM
GTEx:1038.1 nTPM
FANTOM5:474.8 Scaled Tags Per Million
Pig:185.4 nTPM
Mouse:85.2 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029507
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 618.5
Sample id Sample description nTPM
Hippocampus
nTPM: 499.6
2529 Female, age 94, left hemisphere 623.5
2621 Female, age 67, right hemisphere 550.8
1898 Male, age 80, left hemisphere 526.1
1911 Female, age 85, right hemisphere 516.0
2148 Female, age 91, left hemisphere 403.4
1855 Male, age 76, left hemisphere 378.0
Dentate gyrus
nTPM: 577.6
2530 Female, age 94, left hemisphere 1277.5
2531 Female, age 67, both hemispheres 543.6
2010 Male, age 76, both hemispheres 502.0
2246 Female, age 85, both hemispheres 416.0
2528 Male, age 74, both hemispheres 390.0
1927 Female, age 91, both hemispheres 336.3
Entorhinal gyrus
nTPM: 618.5
2686 Male, age 75, right hemisphere 995.5
2117 Female, age 91, right hemisphere 656.8
2764 Male, age 80, right hemisphere 603.5
2613 Female, age 94, left hemisphere 523.0
1938 Female, age 85, left hemisphere 515.9
1787 Male, age 76, left hemisphere 416.1
Hippocampus, CA1
nTPM: 415.5
1873 Female, age 85, both hemispheres 449.6
2082 Female, age 91, right hemisphere 436.6
2749 Male, age 80, left hemisphere 428.1
2527 Male, age 74, both hemispheres 397.5
2045 Male, age 76, both hemispheres 365.6
Hippocampus, CA2
nTPM: 518.1
1963 Male, age 80, left hemisphere 782.9
2437 Female, age 94, left hemisphere 625.0
1940 Female, age 85, left hemisphere 465.1
2249 Male, age 74, both hemispheres 431.5
2113 Female, age 91, right hemisphere 422.8
1892 Male, age 76, both hemispheres 381.5
Hippocampus, CA3
nTPM: 381.8
1891 Female, age 85, both hemispheres 587.2
2861 Female, age 67, both hemispheres 471.6
1867 Male, age 76, both hemispheres 380.0
2137 Male, age 80, left hemisphere 335.6
2620 Female, age 94, left hemisphere 275.1
2436 Male, age 74, both hemispheres 241.3
Parahippocampal cortex
nTPM: 465.0
2692 Male, age 74, both hemispheres 625.4
2532 Female, age 72, left hemisphere 612.7
1850 Male, age 80, both hemispheres 516.3
2622 Female, age 67, right hemisphere 514.9
1990 Female, age 91, right hemisphere 486.9
1933 Female, age 85, both hemispheres 461.5
2245 Female, age 91, both hemispheres 421.7
2018 Male, age 76, both hemispheres 401.4
2693 Female, age 94, both hemispheres 323.4
2250 Female, age 67, right hemisphere 285.8
Perirhinal gyrus
nTPM: 396.9
2848 Male, age 76, right hemisphere 497.1
1794 Male, age 80, right hemisphere 421.3
1841 Female, age 85, right hemisphere 412.0
1847 Female, age 91, left hemisphere 395.9
2521 Female, age 94, right hemisphere 258.3
Subiculum
nTPM: 606.0
2438 Female, age 94, left hemisphere 732.2
2042 Male, age 76, both hemispheres 699.4
1901 Male, age 80, both hemispheres 698.2
1977 Female, age 85, both hemispheres 655.5
2729 Female, age 91, right hemisphere 447.5
2619 Male, age 74, both hemispheres 403.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1038.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1038.1
Samples: 197

Max nTPM: 3984.0
Min nTPM: 48.6
Std nTPM: 675.7
Median nTPM: 836.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3984.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 3663.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 3633.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 3207.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 3197.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 2850.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2711.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2679.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 2641.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 2320.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 2305.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 474.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 474.8
FF:10153-102I9 76 years, female 496.7
FF:10169-103B7 60 years, female 452.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 185.4
Pig sample Sample description nTPM
Subiculum
nTPM: 168.7
Samples: 4

Max nTPM: 212.1
Min nTPM: 136.5
Sample A Female 212.1
Sample B Female 186.0
Sample C Male 140.0
Sample D Male 136.5
Dorsal hippocampus
nTPM: 185.4
Samples: 4

Max nTPM: 260.7
Min nTPM: 84.7
Sample A Female 260.7
Sample B Female 177.1
Sample C Male 219.2
Sample D Male 84.7
Entorhinal cortex
nTPM: 176.9
Samples: 4

Max nTPM: 214.6
Min nTPM: 153.4
Sample A Female 153.4
Sample B Female 214.6
Sample C Male 177.0
Sample D Male 162.4
Ventral hippocampus
nTPM: 144.6
Samples: 4

Max nTPM: 180.8
Min nTPM: 108.7
Sample A Female 139.3
Sample B Female 108.7
Sample C Male 149.6
Sample D Male 180.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.8
Samples: 4

Max nTPM: 75.7
Min nTPM: 64.9
Sample A Male 69.7
Sample B Male 64.9
Sample C Female 75.7
Sample D Female 72.8
Hippocampal formation
nTPM: 85.2
Samples: 4

Max nTPM: 90.7
Min nTPM: 74.4
Sample A Male 90.7
Sample B Male 87.5
Sample C Female 88.0
Sample D Female 74.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
71587888 Antisense, RP_050725_03_G01, Mouse strain C57BL/6J (56 days, male) 3.5
68845502 Antisense, RP_050224_01_H07, Mouse strain C57BL/6J (56 days, male) 3.0

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