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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1380.2
nTPM
FANTOM5:
878.8
Scaled Tags Per Million
Pig:
195.3
nTPM
Allen mouse:
1.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
1380.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1136.4
2188
Female, age 91, both hemispheres
1627.1
2301
Female, age 85, both hemispheres
1159.6
2090
Male, age 80, both hemispheres
1138.8
1984
Male, age 76, both hemispheres
620.0
Dorsal cochlear nucleus nTPM: 1142.1
2802
Male, age 74, right hemisphere
1375.1
2378
Male, age 80, both hemispheres
1225.5
2370
Male, age 61, both hemispheres
1175.0
2187
Female, age 91, both hemispheres
1123.7
2058
Male, age 76, both hemispheres
811.1
Dorsal tegmental nucleus nTPM: 941.4
2083
Male, age 80, both hemispheres
1130.2
2326
Male, age 74, both hemispheres
1087.8
1936
Male, age 76, left hemisphere
858.5
2358
Male, age 61, both hemispheres
688.9
Dorsolateral tegmental area nTPM: 863.3
2654
Male, age 80, both hemispheres
1248.0
2751
Female, age 85, both hemispheres
1021.1
2337
Male, age 61, both hemispheres
912.1
2360
Male, age 74, both hemispheres
701.1
2141
Male, age 76, both hemispheres
434.0
Kolliker-Fuse nucleus nTPM: 1045.0
2793
Female, age 91, left hemisphere
1522.8
2163
Male, age 80, both hemispheres
960.1
2315
Male, age 76, right hemisphere
652.1
Lateral lemniscal nuclei nTPM: 987.3
2320
Female, age 91, left hemisphere
1265.4
2036
Male, age 80, both hemispheres
1073.1
2453
Male, age 74, right hemisphere
943.7
2169
Male, age 76, both hemispheres
908.2
2746
Female, age 85, left hemisphere
746.1
Lateral parabrachial nucleus nTPM: 1028.5
2792
Male, age 76, both hemispheres
1637.6
2013
Male, age 80, both hemispheres
951.3
2790
Male, age 61, both hemispheres
901.3
2139
Female, age 85, right hemisphere
623.9
Lateral vestibular nucleus nTPM: 950.2
2311
Male, age 80, both hemispheres
1039.4
2184
Male, age 76, both hemispheres
861.0
Locus coeruleus nTPM: 511.5
2720
Male, age 74, both hemispheres
796.1
2162
Male, age 80, both hemispheres
600.6
2317
Female, age 72, unknown
489.4
2014
Male, age 55, unknown
486.0
2123
Female, age 91, both hemispheres
451.2
2788
Male, age 74, unknown
438.0
1980
Male, age 76, both hemispheres
319.6
Medial parabrachial nucleus nTPM: 971.3
2170
Female, age 91, both hemispheres
1105.0
2463
Female, age 85, right hemisphere
1018.4
2156
Male, age 61, both hemispheres
947.1
2786
Male, age 76, both hemispheres
918.5
2854
Male, age 80, both hemispheres
867.2
Medial periolivary nuclei nTPM: 957.7
2458
Female, age 91, both hemispheres
1359.9
2081
Male, age 80, both hemispheres
1110.6
2063
Male, age 76, both hemispheres
912.5
2171
Female, age 85, both hemispheres
721.0
2791
Male, age 74, right hemisphere
684.5
Motor facial nucleus nTPM: 1021.5
2795
Female, age 91, both hemispheres
1279.9
2697
Female, age 85, both hemispheres
1234.6
2327
Male, age 80, both hemispheres
1051.1
2126
Male, age 61, both hemispheres
1035.8
2062
Male, age 76, both hemispheres
819.4
2365
Male, age 74, right hemisphere
708.2
Motor trigeminal nucleus nTPM: 1099.1
2321
Female, age 91, both hemispheres
1382.1
2309
Male, age 76, both hemispheres
1088.1
2079
Male, age 80, both hemispheres
1057.2
2560
Male, age 74, both hemispheres
1043.6
2335
Male, age 61, both hemispheres
924.4
Nuclei of the trapezoid body nTPM: 1022.9
2368
Female, age 91, both hemispheres
1378.0
2166
Male, age 80, both hemispheres
1290.1
2159
Male, age 61, both hemispheres
892.0
1983
Male, age 76, both hemispheres
863.7
2735
Female, age 85, both hemispheres
690.7
Nucleus raphe magnus nTPM: 869.3
2459
Female, age 91, both hemispheres
1323.8
2328
Male, age 80, both hemispheres
1081.4
2051
Male, age 76, both hemispheres
917.2
2455
Male, age 74, both hemispheres
714.5
2172
Female, age 85, both hemispheres
622.3
2160
Male, age 61, both hemispheres
556.4
Paramedian reticular nucleus nTPM: 1016.8
2052
Male, age 76, both hemispheres
1307.7
2057
Male, age 80, both hemispheres
998.0
2313
Male, age 61, both hemispheres
928.4
2050
Female, age 85, both hemispheres
833.1
Pedunculopontine tegmental nucleus nTPM: 795.1
2334
Male, age 80, both hemispheres
918.1
2338
Male, age 61, both hemispheres
823.2
1921
Female, age 85, both hemispheres
644.1
Pontine nuclei nTPM: 1002.7
2319
Female, age 91, both hemispheres
1474.2
1968
Male, age 76, left hemisphere
1213.9
2115
Male, age 80, left hemisphere
1140.7
2454
Male, age 74, left hemisphere
997.1
2109
Female, age 72, unknown
887.6
1863
Male, age 55, unknown
886.0
2787
Female, age 85, both hemispheres
725.3
2727
Male, age 61, right hemisphere
696.7
Pontine raphe nucleus nTPM: 683.4
2122
Female, age 85, midline
819.3
2853
Male, age 76, midline
547.5
Posteroventral cochlear nucleus nTPM: 1380.2
2135
Female, age 91, both hemispheres
1842.6
2341
Male, age 80, both hemispheres
1757.9
2371
Male, age 61, both hemispheres
1462.8
2070
Male, age 76, both hemispheres
921.5
2752
Female, age 85, both hemispheres
915.9
Principal sensory trigeminal nucleus nTPM: 894.2
2367
Female, age 91, left hemisphere
1241.4
2324
Male, age 76, both hemispheres
841.1
2008
Male, age 80, left hemisphere
796.1
2158
Male, age 61, both hemispheres
698.0
Reticular pontine nucleus, caudal nTPM: 1167.9
2457
Female, age 91, both hemispheres
1476.1
2092
Male, age 76, both hemispheres
1092.2
2559
Male, age 74, both hemispheres
1092.2
2332
Male, age 80, right hemisphere
1011.2
Reticular pontine nucleus, oral nTPM: 1009.7
2366
Female, age 91, both hemispheres
1631.4
1939
Male, age 80, both hemispheres
941.5
2012
Female, age 85, both hemispheres
846.2
2167
Male, age 76, both hemispheres
818.1
2361
Male, age 74, both hemispheres
811.1
Reticulotegmental nucleus nTPM: 1136.3
2322
Female, age 91, both hemispheres
1357.3
2452
Male, age 74, both hemispheres
1272.1
2333
Male, age 80, both hemispheres
1139.4
2325
Male, age 76, both hemispheres
776.6
Spinal trigeminal nucleus, oral nTPM: 836.4
2164
Male, age 80, both hemispheres
1091.7
1978
Male, age 76, both hemispheres
755.6
2737
Female, age 85, both hemispheres
662.0
Subcoeruleus area nTPM: 975.9
2369
Female, age 85, left hemisphere
1196.5
2451
Male, age 74, both hemispheres
1169.1
2089
Male, age 76, left hemisphere
996.0
1958
Male, age 80, both hemispheres
847.8
2323
Female, age 91, left hemisphere
670.1
Superior olive nTPM: 1126.1
2020
Male, age 76, both hemispheres
1588.9
2561
Female, age 91, both hemispheres
1407.8
2329
Male, age 80, right hemisphere
1149.6
1875
Female, age 85, both hemispheres
829.3
2364
Male, age 74, right hemisphere
655.0
Ventral periolivary nuclei nTPM: 1103.1
2023
Male, age 76, both hemispheres
1530.5
2794
Female, age 91, left hemisphere
1332.4
2165
Male, age 80, both hemispheres
954.0
2130
Female, age 85, both hemispheres
595.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 945.1
2456
Female, age 91, both hemispheres
1357.6
1959
Male, age 76, both hemispheres
1041.3
2161
Male, age 80, both hemispheres
1009.7
2840
Female, age 85, both hemispheres
801.7
2359
Male, age 61, both hemispheres
732.9
2449
Male, age 74, both hemispheres
727.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
195.3
Pig sample
Sample description
nTPM
Pons nTPM: 195.3
Samples: 4
Max nTPM: 224.9
Min nTPM: 169.1
Sample A
Female
169.1
Sample B
Female
169.9
Sample C
Male
224.9
Sample D
Male
217.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
