HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:26.8 nTPM
HPA Brain:54.2 nTPM
GTEx:26.8 nTPM
FANTOM5:105.1 Scaled Tags Per Million
Pig:60.6 nTPM
Mouse:58.1 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000528
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.2
Sample id Sample description nTPM
Hippocampus
nTPM: 43.5
1898 Male, age 80, left hemisphere 49.0
2529 Female, age 94, left hemisphere 46.8
2621 Female, age 67, right hemisphere 43.3
1855 Male, age 76, left hemisphere 42.1
2148 Female, age 91, left hemisphere 40.1
1911 Female, age 85, right hemisphere 39.6
Dentate gyrus
nTPM: 42.5
2530 Female, age 94, left hemisphere 49.3
2010 Male, age 76, both hemispheres 46.9
1927 Female, age 91, both hemispheres 43.1
2531 Female, age 67, both hemispheres 41.4
2246 Female, age 85, both hemispheres 41.0
2528 Male, age 74, both hemispheres 33.2
Entorhinal gyrus
nTPM: 45.8
1938 Female, age 85, left hemisphere 52.7
1787 Male, age 76, left hemisphere 49.4
2764 Male, age 80, right hemisphere 48.0
2686 Male, age 75, right hemisphere 44.6
2613 Female, age 94, left hemisphere 41.7
2117 Female, age 91, right hemisphere 38.2
Hippocampus, CA1
nTPM: 45.0
2749 Male, age 80, left hemisphere 55.8
2045 Male, age 76, both hemispheres 46.5
1873 Female, age 85, both hemispheres 43.1
2527 Male, age 74, both hemispheres 42.2
2082 Female, age 91, right hemisphere 37.3
Hippocampus, CA2
nTPM: 45.1
1892 Male, age 76, both hemispheres 59.6
1963 Male, age 80, left hemisphere 46.8
1940 Female, age 85, left hemisphere 45.0
2437 Female, age 94, left hemisphere 43.3
2113 Female, age 91, right hemisphere 40.2
2249 Male, age 74, both hemispheres 35.8
Hippocampus, CA3
nTPM: 45.0
2137 Male, age 80, left hemisphere 55.3
1867 Male, age 76, both hemispheres 54.4
1891 Female, age 85, both hemispheres 42.0
2620 Female, age 94, left hemisphere 40.1
2861 Female, age 67, both hemispheres 40.0
2436 Male, age 74, both hemispheres 38.2
Parahippocampal cortex
nTPM: 47.0
1850 Male, age 80, both hemispheres 62.8
2532 Female, age 72, left hemisphere 52.4
1933 Female, age 85, both hemispheres 49.5
2018 Male, age 76, both hemispheres 49.3
1990 Female, age 91, right hemisphere 48.5
2245 Female, age 91, both hemispheres 45.1
2250 Female, age 67, right hemisphere 43.1
2693 Female, age 94, both hemispheres 41.5
2692 Male, age 74, both hemispheres 39.9
2622 Female, age 67, right hemisphere 37.5
Perirhinal gyrus
nTPM: 54.2
1847 Female, age 91, left hemisphere 60.7
1794 Male, age 80, right hemisphere 57.5
1841 Female, age 85, right hemisphere 56.5
2848 Male, age 76, right hemisphere 51.1
2521 Female, age 94, right hemisphere 45.3
Subiculum
nTPM: 43.9
2438 Female, age 94, left hemisphere 51.3
1977 Female, age 85, both hemispheres 49.4
1901 Male, age 80, both hemispheres 45.5
2619 Male, age 74, both hemispheres 41.8
2042 Male, age 76, both hemispheres 41.6
2729 Female, age 91, right hemisphere 33.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.8
Samples: 197

Max nTPM: 47.6
Min nTPM: 16.3
Std nTPM: 5.5
Median nTPM: 25.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 47.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 45.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 45.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 43.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 39.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 39.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 38.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 37.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 36.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.1
FF:10169-103B7 60 years, female 111.1
FF:10153-102I9 76 years, female 99.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.6
Pig sample Sample description nTPM
Subiculum
nTPM: 51.3
Samples: 4

Max nTPM: 57.9
Min nTPM: 46.8
Sample A Female 57.9
Sample B Female 47.9
Sample C Male 46.8
Sample D Male 52.6
Dorsal hippocampus
nTPM: 59.7
Samples: 4

Max nTPM: 69.6
Min nTPM: 49.3
Sample A Female 69.6
Sample B Female 61.7
Sample C Male 58.1
Sample D Male 49.3
Entorhinal cortex
nTPM: 60.6
Samples: 4

Max nTPM: 68.5
Min nTPM: 56.4
Sample A Female 68.5
Sample B Female 60.6
Sample C Male 56.4
Sample D Male 57.0
Ventral hippocampus
nTPM: 53.6
Samples: 4

Max nTPM: 63.1
Min nTPM: 44.9
Sample A Female 54.2
Sample B Female 44.9
Sample C Male 52.2
Sample D Male 63.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.7
Samples: 4

Max nTPM: 59.2
Min nTPM: 52.7
Sample A Male 56.9
Sample B Male 58.0
Sample C Female 59.2
Sample D Female 52.7
Hippocampal formation
nTPM: 58.1
Samples: 4

Max nTPM: 62.1
Min nTPM: 53.8
Sample A Male 62.1
Sample B Male 55.5
Sample C Female 61.1
Sample D Female 53.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
69015649 Antisense, RP_050315_01_D09, Mouse strain C57BL/6J (56 days, male) 2.2

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