HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:97.0 nTPM
HPA Brain:79.2 nTPM
GTEx:97.0 nTPM
FANTOM5:65.5 Scaled Tags Per Million
Pig:54.1 nTPM
Mouse:19.0 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049064
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.2
Sample id Sample description nTPM
Hippocampus
nTPM: 71.5
1855 Male, age 76, left hemisphere 80.6
1898 Male, age 80, left hemisphere 79.1
2529 Female, age 94, left hemisphere 79.1
2621 Female, age 67, right hemisphere 67.1
2148 Female, age 91, left hemisphere 65.0
1911 Female, age 85, right hemisphere 57.9
Dentate gyrus
nTPM: 78.4
2530 Female, age 94, left hemisphere 93.8
2010 Male, age 76, both hemispheres 83.4
1927 Female, age 91, both hemispheres 80.1
2246 Female, age 85, both hemispheres 74.3
2528 Male, age 74, both hemispheres 69.8
2531 Female, age 67, both hemispheres 69.0
Entorhinal gyrus
nTPM: 67.0
1787 Male, age 76, left hemisphere 80.0
2764 Male, age 80, right hemisphere 79.3
1938 Female, age 85, left hemisphere 72.3
2117 Female, age 91, right hemisphere 63.5
2613 Female, age 94, left hemisphere 62.9
2686 Male, age 75, right hemisphere 44.0
Hippocampus, CA1
nTPM: 79.2
2749 Male, age 80, left hemisphere 111.8
2527 Male, age 74, both hemispheres 83.7
2045 Male, age 76, both hemispheres 77.8
2082 Female, age 91, right hemisphere 63.7
1873 Female, age 85, both hemispheres 59.0
Hippocampus, CA2
nTPM: 70.5
2437 Female, age 94, left hemisphere 80.9
2249 Male, age 74, both hemispheres 79.9
1963 Male, age 80, left hemisphere 79.2
1892 Male, age 76, both hemispheres 74.4
1940 Female, age 85, left hemisphere 58.0
2113 Female, age 91, right hemisphere 50.5
Hippocampus, CA3
nTPM: 70.7
2137 Male, age 80, left hemisphere 90.2
2436 Male, age 74, both hemispheres 78.9
2620 Female, age 94, left hemisphere 78.9
1867 Male, age 76, both hemispheres 65.1
1891 Female, age 85, both hemispheres 55.8
2861 Female, age 67, both hemispheres 55.1
Parahippocampal cortex
nTPM: 64.9
2250 Female, age 67, right hemisphere 81.8
2245 Female, age 91, both hemispheres 79.5
1990 Female, age 91, right hemisphere 71.6
1933 Female, age 85, both hemispheres 67.7
1850 Male, age 80, both hemispheres 67.5
2018 Male, age 76, both hemispheres 66.2
2532 Female, age 72, left hemisphere 61.2
2693 Female, age 94, both hemispheres 52.8
2622 Female, age 67, right hemisphere 51.5
2692 Male, age 74, both hemispheres 49.1
Perirhinal gyrus
nTPM: 76.5
1847 Female, age 91, left hemisphere 88.0
1794 Male, age 80, right hemisphere 87.4
1841 Female, age 85, right hemisphere 77.4
2521 Female, age 94, right hemisphere 76.3
2848 Male, age 76, right hemisphere 53.5
Subiculum
nTPM: 66.5
2438 Female, age 94, left hemisphere 81.4
1977 Female, age 85, both hemispheres 68.6
2619 Male, age 74, both hemispheres 67.2
1901 Male, age 80, both hemispheres 62.5
2729 Female, age 91, right hemisphere 61.3
2042 Male, age 76, both hemispheres 58.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 97.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 97.0
Samples: 197

Max nTPM: 277.6
Min nTPM: 24.1
Std nTPM: 37.7
Median nTPM: 91.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 277.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 208.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 200.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 188.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 184.3
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 182.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 172.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 167.4
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 166.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 164.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 164.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.5
FF:10169-103B7 60 years, female 86.2
FF:10153-102I9 76 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.1
Pig sample Sample description nTPM
Subiculum
nTPM: 45.1
Samples: 4

Max nTPM: 66.3
Min nTPM: 35.2
Sample A Female 66.3
Sample B Female 41.3
Sample C Male 37.4
Sample D Male 35.2
Dorsal hippocampus
nTPM: 54.1
Samples: 4

Max nTPM: 77.1
Min nTPM: 32.2
Sample A Female 77.1
Sample B Female 49.4
Sample C Male 57.7
Sample D Male 32.2
Entorhinal cortex
nTPM: 53.7
Samples: 4

Max nTPM: 71.4
Min nTPM: 36.4
Sample A Female 46.3
Sample B Female 71.4
Sample C Male 60.5
Sample D Male 36.4
Ventral hippocampus
nTPM: 50.4
Samples: 4

Max nTPM: 61.9
Min nTPM: 39.2
Sample A Female 61.9
Sample B Female 43.3
Sample C Male 57.0
Sample D Male 39.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 19.8
Min nTPM: 17.1
Sample A Male 17.1
Sample B Male 19.7
Sample C Female 19.5
Sample D Female 19.8
Hippocampal formation
nTPM: 19.0
Samples: 4

Max nTPM: 20.3
Min nTPM: 17.8
Sample A Male 18.7
Sample B Male 20.3
Sample C Female 17.8
Sample D Female 19.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
68745372 Antisense, RP_050210_01_G11, Mouse strain C57BL/6J (56 days, male) 2.8

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