HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.2 nTPM
HPA Brain:13.1 nTPM
GTEx:12.2 nTPM
FANTOM5:14.7 Scaled Tags Per Million
Pig:5.3 nTPM
Mouse:24.1 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051772
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.1
Sample id Sample description nTPM
Hippocampus
nTPM: 12.5
2148 Female, age 91, left hemisphere 14.2
2621 Female, age 67, right hemisphere 14.1
1911 Female, age 85, right hemisphere 12.1
1855 Male, age 76, left hemisphere 11.6
1898 Male, age 80, left hemisphere 11.5
2529 Female, age 94, left hemisphere 11.5
Dentate gyrus
nTPM: 11.6
2530 Female, age 94, left hemisphere 13.0
2531 Female, age 67, both hemispheres 12.5
2246 Female, age 85, both hemispheres 11.7
2528 Male, age 74, both hemispheres 11.7
1927 Female, age 91, both hemispheres 11.6
2010 Male, age 76, both hemispheres 9.1
Entorhinal gyrus
nTPM: 12.9
1787 Male, age 76, left hemisphere 14.3
2686 Male, age 75, right hemisphere 13.3
2613 Female, age 94, left hemisphere 13.0
2764 Male, age 80, right hemisphere 12.9
1938 Female, age 85, left hemisphere 12.4
2117 Female, age 91, right hemisphere 11.7
Hippocampus, CA1
nTPM: 11.1
2082 Female, age 91, right hemisphere 13.8
1873 Female, age 85, both hemispheres 11.4
2527 Male, age 74, both hemispheres 10.7
2045 Male, age 76, both hemispheres 10.0
2749 Male, age 80, left hemisphere 9.6
Hippocampus, CA2
nTPM: 12.3
1940 Female, age 85, left hemisphere 13.8
2113 Female, age 91, right hemisphere 13.6
2437 Female, age 94, left hemisphere 12.8
1892 Male, age 76, both hemispheres 11.9
2249 Male, age 74, both hemispheres 11.2
1963 Male, age 80, left hemisphere 10.2
Hippocampus, CA3
nTPM: 12.6
2861 Female, age 67, both hemispheres 15.1
2620 Female, age 94, left hemisphere 15.0
2436 Male, age 74, both hemispheres 12.9
1867 Male, age 76, both hemispheres 11.5
1891 Female, age 85, both hemispheres 11.2
2137 Male, age 80, left hemisphere 10.1
Parahippocampal cortex
nTPM: 13.1
2622 Female, age 67, right hemisphere 17.5
2692 Male, age 74, both hemispheres 14.0
2250 Female, age 67, right hemisphere 13.6
2532 Female, age 72, left hemisphere 12.8
1990 Female, age 91, right hemisphere 12.6
1850 Male, age 80, both hemispheres 12.5
2018 Male, age 76, both hemispheres 12.5
2245 Female, age 91, both hemispheres 12.0
2693 Female, age 94, both hemispheres 11.6
1933 Female, age 85, both hemispheres 11.5
Perirhinal gyrus
nTPM: 12.3
1847 Female, age 91, left hemisphere 13.2
2848 Male, age 76, right hemisphere 13.0
1841 Female, age 85, right hemisphere 12.3
1794 Male, age 80, right hemisphere 11.9
2521 Female, age 94, right hemisphere 11.2
Subiculum
nTPM: 12.1
2438 Female, age 94, left hemisphere 14.2
2729 Female, age 91, right hemisphere 12.9
2619 Male, age 74, both hemispheres 12.1
1977 Female, age 85, both hemispheres 11.2
1901 Male, age 80, both hemispheres 11.1
2042 Male, age 76, both hemispheres 10.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.2
Samples: 197

Max nTPM: 22.8
Min nTPM: 4.7
Std nTPM: 3.1
Median nTPM: 11.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 22.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 21.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 19.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 19.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 19.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 19.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 18.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 18.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 18.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 17.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 17.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.7
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.3
Pig sample Sample description nTPM
Subiculum
nTPM: 4.8
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.2
Sample A Female 4.8
Sample B Female 5.7
Sample C Male 4.6
Sample D Male 4.2
Dorsal hippocampus
nTPM: 5.3
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.7
Sample A Female 5.3
Sample B Female 6.0
Sample C Male 4.7
Sample D Male 5.1
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.0
Sample A Female 4.0
Sample B Female 6.4
Sample C Male 4.6
Sample D Male 4.8
Ventral hippocampus
nTPM: 5.3
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.5
Sample A Female 4.5
Sample B Female 6.5
Sample C Male 5.6
Sample D Male 4.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 27.1
Min nTPM: 20.9
Sample A Male 27.1
Sample B Male 24.3
Sample C Female 20.9
Sample D Female 23.9
Hippocampal formation
nTPM: 21.9
Samples: 4

Max nTPM: 25.3
Min nTPM: 17.9
Sample A Male 25.3
Sample B Male 17.9
Sample C Female 19.3
Sample D Female 25.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
69549639 Antisense, RP_050309_01_H03, Mouse strain C57BL/6J (56 days, male) 2.7

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