HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:36.0 nTPM
HPA Brain:31.3 nTPM
GTEx:36.0 nTPM
FANTOM5:34.8 Scaled Tags Per Million
Pig:6.7 nTPM
Mouse:5.6 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040126
Glial cells Not detected
Neuronal cells Medium

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.3
Sample id Sample description nTPM
Hippocampus
nTPM: 31.3
2529 Female, age 94, left hemisphere 37.5
1911 Female, age 85, right hemisphere 33.3
1898 Male, age 80, left hemisphere 30.6
1855 Male, age 76, left hemisphere 30.1
2621 Female, age 67, right hemisphere 29.9
2148 Female, age 91, left hemisphere 26.7
Dentate gyrus
nTPM: 28.3
2010 Male, age 76, both hemispheres 33.2
2528 Male, age 74, both hemispheres 31.1
2530 Female, age 94, left hemisphere 29.1
2246 Female, age 85, both hemispheres 29.0
1927 Female, age 91, both hemispheres 26.8
2531 Female, age 67, both hemispheres 20.9
Entorhinal gyrus
nTPM: 27.0
2117 Female, age 91, right hemisphere 34.1
2764 Male, age 80, right hemisphere 27.5
1938 Female, age 85, left hemisphere 27.4
1787 Male, age 76, left hemisphere 27.0
2686 Male, age 75, right hemisphere 25.2
2613 Female, age 94, left hemisphere 20.8
Hippocampus, CA1
nTPM: 29.1
2527 Male, age 74, both hemispheres 33.4
1873 Female, age 85, both hemispheres 31.1
2082 Female, age 91, right hemisphere 28.2
2045 Male, age 76, both hemispheres 27.1
2749 Male, age 80, left hemisphere 25.8
Hippocampus, CA2
nTPM: 28.2
2249 Male, age 74, both hemispheres 33.4
1963 Male, age 80, left hemisphere 30.1
2113 Female, age 91, right hemisphere 27.8
2437 Female, age 94, left hemisphere 27.4
1940 Female, age 85, left hemisphere 25.6
1892 Male, age 76, both hemispheres 24.9
Hippocampus, CA3
nTPM: 27.4
1891 Female, age 85, both hemispheres 35.8
2436 Male, age 74, both hemispheres 30.0
1867 Male, age 76, both hemispheres 29.6
2620 Female, age 94, left hemisphere 23.7
2137 Male, age 80, left hemisphere 23.1
2861 Female, age 67, both hemispheres 21.9
Parahippocampal cortex
nTPM: 25.8
2245 Female, age 91, both hemispheres 28.5
2018 Male, age 76, both hemispheres 28.4
2692 Male, age 74, both hemispheres 27.5
1990 Female, age 91, right hemisphere 27.3
1933 Female, age 85, both hemispheres 26.3
2250 Female, age 67, right hemisphere 25.9
2532 Female, age 72, left hemisphere 25.8
1850 Male, age 80, both hemispheres 25.1
2622 Female, age 67, right hemisphere 22.4
2693 Female, age 94, both hemispheres 20.9
Perirhinal gyrus
nTPM: 23.5
1794 Male, age 80, right hemisphere 26.3
1847 Female, age 91, left hemisphere 25.1
2521 Female, age 94, right hemisphere 22.9
1841 Female, age 85, right hemisphere 22.3
2848 Male, age 76, right hemisphere 20.9
Subiculum
nTPM: 30.5
2042 Male, age 76, both hemispheres 38.8
1901 Male, age 80, both hemispheres 31.1
2729 Female, age 91, right hemisphere 29.2
1977 Female, age 85, both hemispheres 28.5
2438 Female, age 94, left hemisphere 28.5
2619 Male, age 74, both hemispheres 26.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.0
Samples: 197

Max nTPM: 68.0
Min nTPM: 20.2
Std nTPM: 7.8
Median nTPM: 35.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 68.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 65.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 54.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 53.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 52.5
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 50.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 50.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 49.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 49.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 49.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 48.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.8
FF:10153-102I9 76 years, female 35.4
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.7
Pig sample Sample description nTPM
Subiculum
nTPM: 6.1
Samples: 4

Max nTPM: 9.7
Min nTPM: 4.7
Sample A Female 9.7
Sample B Female 5.3
Sample C Male 4.8
Sample D Male 4.7
Dorsal hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 8.8
Min nTPM: 5.1
Sample A Female 8.8
Sample B Female 7.0
Sample C Male 6.1
Sample D Male 5.1
Entorhinal cortex
nTPM: 6.3
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.2
Sample A Female 6.7
Sample B Female 7.3
Sample C Male 6.0
Sample D Male 5.2
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.4
Sample A Female 6.8
Sample B Female 4.4
Sample C Male 6.6
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.9
Samples: 4

Max nTPM: 6.4
Min nTPM: 3.6
Sample A Male 4.7
Sample B Male 6.4
Sample C Female 4.7
Sample D Female 3.6
Hippocampal formation
nTPM: 5.7
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.9
Sample A Male 5.9
Sample B Male 6.4
Sample C Female 4.9
Sample D Female 5.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69443349 Antisense, RP_050414_03_H07, Mouse strain C57BL/6J (56 days, male) 1.6

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