HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:44.0 nTPM
HPA Brain:80.6 nTPM
GTEx:44.0 nTPM
FANTOM5:64.5 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:24.8 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053126
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 80.6
Sample id Sample description nTPM
Hippocampus
nTPM: 70.8
2621 Female, age 67, right hemisphere 79.1
2529 Female, age 94, left hemisphere 78.6
2148 Female, age 91, left hemisphere 74.8
1911 Female, age 85, right hemisphere 71.3
1898 Male, age 80, left hemisphere 64.3
1855 Male, age 76, left hemisphere 56.7
Dentate gyrus
nTPM: 68.5
2531 Female, age 67, both hemispheres 82.6
2530 Female, age 94, left hemisphere 68.8
2528 Male, age 74, both hemispheres 67.2
1927 Female, age 91, both hemispheres 66.9
2246 Female, age 85, both hemispheres 64.0
2010 Male, age 76, both hemispheres 61.5
Entorhinal gyrus
nTPM: 80.6
2613 Female, age 94, left hemisphere 92.8
2686 Male, age 75, right hemisphere 92.6
1787 Male, age 76, left hemisphere 91.9
2764 Male, age 80, right hemisphere 76.7
1938 Female, age 85, left hemisphere 70.0
2117 Female, age 91, right hemisphere 59.9
Hippocampus, CA1
nTPM: 62.4
2527 Male, age 74, both hemispheres 68.1
1873 Female, age 85, both hemispheres 67.6
2045 Male, age 76, both hemispheres 60.8
2082 Female, age 91, right hemisphere 59.4
2749 Male, age 80, left hemisphere 56.1
Hippocampus, CA2
nTPM: 68.3
1963 Male, age 80, left hemisphere 78.2
2437 Female, age 94, left hemisphere 71.0
1940 Female, age 85, left hemisphere 70.2
1892 Male, age 76, both hemispheres 68.3
2113 Female, age 91, right hemisphere 64.0
2249 Male, age 74, both hemispheres 58.0
Hippocampus, CA3
nTPM: 71.1
2861 Female, age 67, both hemispheres 110.2
2620 Female, age 94, left hemisphere 92.0
1867 Male, age 76, both hemispheres 69.9
1891 Female, age 85, both hemispheres 60.1
2137 Male, age 80, left hemisphere 50.9
2436 Male, age 74, both hemispheres 43.4
Parahippocampal cortex
nTPM: 75.2
2622 Female, age 67, right hemisphere 104.4
2250 Female, age 67, right hemisphere 90.5
1990 Female, age 91, right hemisphere 77.7
2692 Male, age 74, both hemispheres 76.0
2245 Female, age 91, both hemispheres 74.2
2693 Female, age 94, both hemispheres 73.9
1933 Female, age 85, both hemispheres 71.6
2018 Male, age 76, both hemispheres 68.7
2532 Female, age 72, left hemisphere 61.6
1850 Male, age 80, both hemispheres 53.1
Perirhinal gyrus
nTPM: 64.0
2521 Female, age 94, right hemisphere 73.7
1847 Female, age 91, left hemisphere 70.0
2848 Male, age 76, right hemisphere 62.4
1794 Male, age 80, right hemisphere 58.1
1841 Female, age 85, right hemisphere 55.7
Subiculum
nTPM: 64.2
2619 Male, age 74, both hemispheres 79.6
2729 Female, age 91, right hemisphere 72.6
1977 Female, age 85, both hemispheres 68.3
2042 Male, age 76, both hemispheres 59.1
1901 Male, age 80, both hemispheres 53.7
2438 Female, age 94, left hemisphere 52.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.0
Samples: 197

Max nTPM: 100.2
Min nTPM: 10.6
Std nTPM: 15.9
Median nTPM: 41.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 100.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 98.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 90.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 84.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 81.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 80.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 79.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 73.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 72.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 71.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 70.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.5
FF:10153-102I9 76 years, female 67.7
FF:10169-103B7 60 years, female 61.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.9
Pig sample Sample description nTPM
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 14.2
Min nTPM: 8.3
Sample A Female 14.2
Sample B Female 9.8
Sample C Male 11.2
Sample D Male 8.3
Dorsal hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.0
Sample A Female 10.0
Sample B Female 9.5
Sample C Male 8.1
Sample D Male 6.0
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.7
Sample A Female 10.0
Sample B Female 7.7
Sample C Male 11.9
Sample D Male 9.5
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 14.2
Min nTPM: 7.9
Sample A Female 9.2
Sample B Female 7.9
Sample C Male 14.2
Sample D Male 9.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 28.6
Min nTPM: 22.7
Sample A Male 22.7
Sample B Male 24.8
Sample C Female 22.9
Sample D Female 28.6
Hippocampal formation
nTPM: 23.8
Samples: 4

Max nTPM: 24.9
Min nTPM: 22.8
Sample A Male 23.5
Sample B Male 24.9
Sample C Female 22.8
Sample D Female 24.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
71211764 Antisense, RP_050816_02_D08, Mouse strain C57BL/6J (56 days, male) 1.6

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