HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:21.9 nTPM
HPA Brain:32.7 nTPM
GTEx:21.9 nTPM
FANTOM5:82.8 Scaled Tags Per Million
Pig:32.0 nTPM
Mouse:105.3 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047928
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.7
Sample id Sample description nTPM
Hippocampus
nTPM: 23.8
1898 Male, age 80, left hemisphere 30.1
1855 Male, age 76, left hemisphere 25.0
1911 Female, age 85, right hemisphere 24.6
2621 Female, age 67, right hemisphere 24.1
2148 Female, age 91, left hemisphere 22.3
2529 Female, age 94, left hemisphere 16.6
Dentate gyrus
nTPM: 25.2
1927 Female, age 91, both hemispheres 40.2
2010 Male, age 76, both hemispheres 26.7
2246 Female, age 85, both hemispheres 24.6
2530 Female, age 94, left hemisphere 22.0
2528 Male, age 74, both hemispheres 19.9
2531 Female, age 67, both hemispheres 18.0
Entorhinal gyrus
nTPM: 24.4
1938 Female, age 85, left hemisphere 35.4
1787 Male, age 76, left hemisphere 26.5
2613 Female, age 94, left hemisphere 25.3
2764 Male, age 80, right hemisphere 24.8
2117 Female, age 91, right hemisphere 17.3
2686 Male, age 75, right hemisphere 16.9
Hippocampus, CA1
nTPM: 30.3
2749 Male, age 80, left hemisphere 54.7
1873 Female, age 85, both hemispheres 30.9
2045 Male, age 76, both hemispheres 27.3
2527 Male, age 74, both hemispheres 20.9
2082 Female, age 91, right hemisphere 17.5
Hippocampus, CA2
nTPM: 25.4
1892 Male, age 76, both hemispheres 39.3
1963 Male, age 80, left hemisphere 31.3
1940 Female, age 85, left hemisphere 24.3
2437 Female, age 94, left hemisphere 19.8
2113 Female, age 91, right hemisphere 18.9
2249 Male, age 74, both hemispheres 18.8
Hippocampus, CA3
nTPM: 31.6
2137 Male, age 80, left hemisphere 53.0
1867 Male, age 76, both hemispheres 36.9
2436 Male, age 74, both hemispheres 32.9
2620 Female, age 94, left hemisphere 25.7
1891 Female, age 85, both hemispheres 24.2
2861 Female, age 67, both hemispheres 17.0
Parahippocampal cortex
nTPM: 26.0
1850 Male, age 80, both hemispheres 34.1
1933 Female, age 85, both hemispheres 30.6
2693 Female, age 94, both hemispheres 30.0
1990 Female, age 91, right hemisphere 27.7
2250 Female, age 67, right hemisphere 27.2
2245 Female, age 91, both hemispheres 26.8
2532 Female, age 72, left hemisphere 24.3
2018 Male, age 76, both hemispheres 22.5
2692 Male, age 74, both hemispheres 19.2
2622 Female, age 67, right hemisphere 17.4
Perirhinal gyrus
nTPM: 32.7
1847 Female, age 91, left hemisphere 38.9
1794 Male, age 80, right hemisphere 32.5
1841 Female, age 85, right hemisphere 32.5
2521 Female, age 94, right hemisphere 30.7
2848 Male, age 76, right hemisphere 29.0
Subiculum
nTPM: 23.2
1901 Male, age 80, both hemispheres 34.7
1977 Female, age 85, both hemispheres 25.0
2042 Male, age 76, both hemispheres 24.0
2438 Female, age 94, left hemisphere 22.9
2619 Male, age 74, both hemispheres 16.3
2729 Female, age 91, right hemisphere 16.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.9
Samples: 197

Max nTPM: 44.5
Min nTPM: 8.6
Std nTPM: 8.5
Median nTPM: 21.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 40.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 40.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 39.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 38.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 38.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 38.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 38.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 38.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.8
FF:10169-103B7 60 years, female 92.4
FF:10153-102I9 76 years, female 73.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.0
Pig sample Sample description nTPM
Subiculum
nTPM: 27.9
Samples: 4

Max nTPM: 31.1
Min nTPM: 26.1
Sample A Female 31.1
Sample B Female 26.1
Sample C Male 27.6
Sample D Male 26.8
Dorsal hippocampus
nTPM: 32.0
Samples: 4

Max nTPM: 35.9
Min nTPM: 28.7
Sample A Female 35.9
Sample B Female 30.4
Sample C Male 32.9
Sample D Male 28.7
Entorhinal cortex
nTPM: 28.5
Samples: 4

Max nTPM: 30.9
Min nTPM: 26.3
Sample A Female 30.9
Sample B Female 29.6
Sample C Male 26.3
Sample D Male 27.1
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 32.3
Min nTPM: 22.6
Sample A Female 29.2
Sample B Female 25.5
Sample C Male 22.6
Sample D Male 32.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.3
Samples: 4

Max nTPM: 111.8
Min nTPM: 100.8
Sample A Male 102.4
Sample B Male 111.8
Sample C Female 100.8
Sample D Female 106.3
Hippocampal formation
nTPM: 96.3
Samples: 4

Max nTPM: 106.0
Min nTPM: 88.8
Sample A Male 106.0
Sample B Male 95.8
Sample C Female 94.5
Sample D Female 88.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
68637862 Antisense, RP_050126_01_G06, Mouse strain C57BL/6J (56 days, male) 10.0

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