HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:8.6 nTPM
HPA Brain:49.4 nTPM
GTEx:8.6 nTPM
FANTOM5:121.9 Scaled Tags Per Million
Pig:52.7 nTPM
Mouse:60.8 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012323Antibody CAB008970
Glial cells LowNot detected
Neuronal cells HighLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.4
Sample id Sample description nTPM
Hippocampus
nTPM: 49.4
2621 Female, age 67, right hemisphere 87.6
1855 Male, age 76, left hemisphere 51.9
1911 Female, age 85, right hemisphere 48.2
1898 Male, age 80, left hemisphere 46.5
2148 Female, age 91, left hemisphere 31.9
2529 Female, age 94, left hemisphere 30.3
Dentate gyrus
nTPM: 34.0
2010 Male, age 76, both hemispheres 39.9
2246 Female, age 85, both hemispheres 39.1
2528 Male, age 74, both hemispheres 33.9
2530 Female, age 94, left hemisphere 32.0
1927 Female, age 91, both hemispheres 29.7
2531 Female, age 67, both hemispheres 29.5
Entorhinal gyrus
nTPM: 29.9
2117 Female, age 91, right hemisphere 46.5
1787 Male, age 76, left hemisphere 34.8
2613 Female, age 94, left hemisphere 28.6
1938 Female, age 85, left hemisphere 26.4
2764 Male, age 80, right hemisphere 26.1
2686 Male, age 75, right hemisphere 17.1
Hippocampus, CA1
nTPM: 34.2
2082 Female, age 91, right hemisphere 45.8
2045 Male, age 76, both hemispheres 43.8
1873 Female, age 85, both hemispheres 34.6
2527 Male, age 74, both hemispheres 25.3
2749 Male, age 80, left hemisphere 21.6
Hippocampus, CA2
nTPM: 40.0
1940 Female, age 85, left hemisphere 66.9
2113 Female, age 91, right hemisphere 46.7
2437 Female, age 94, left hemisphere 37.7
1963 Male, age 80, left hemisphere 32.0
1892 Male, age 76, both hemispheres 31.4
2249 Male, age 74, both hemispheres 25.4
Hippocampus, CA3
nTPM: 28.0
1867 Male, age 76, both hemispheres 39.1
2861 Female, age 67, both hemispheres 38.6
1891 Female, age 85, both hemispheres 32.7
2436 Male, age 74, both hemispheres 27.2
2137 Male, age 80, left hemisphere 24.1
2620 Female, age 94, left hemisphere 6.4
Parahippocampal cortex
nTPM: 33.5
2250 Female, age 67, right hemisphere 85.3
2018 Male, age 76, both hemispheres 48.4
2693 Female, age 94, both hemispheres 33.5
2245 Female, age 91, both hemispheres 27.3
1933 Female, age 85, both hemispheres 26.2
1990 Female, age 91, right hemisphere 24.2
2532 Female, age 72, left hemisphere 24.2
2622 Female, age 67, right hemisphere 22.5
1850 Male, age 80, both hemispheres 22.2
2692 Male, age 74, both hemispheres 21.4
Perirhinal gyrus
nTPM: 32.5
2521 Female, age 94, right hemisphere 48.3
1841 Female, age 85, right hemisphere 30.0
1847 Female, age 91, left hemisphere 29.3
2848 Male, age 76, right hemisphere 28.5
1794 Male, age 80, right hemisphere 26.2
Subiculum
nTPM: 38.0
2729 Female, age 91, right hemisphere 53.2
2042 Male, age 76, both hemispheres 49.1
2438 Female, age 94, left hemisphere 36.4
2619 Male, age 74, both hemispheres 34.3
1901 Male, age 80, both hemispheres 30.2
1977 Female, age 85, both hemispheres 24.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.6
Samples: 197

Max nTPM: 59.1
Min nTPM: 0.3
Std nTPM: 8.3
Median nTPM: 6.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 59.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 45.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 42.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 34.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 32.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 32.2
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 29.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 25.5
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 24.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 23.3
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 23.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 121.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 121.9
FF:10153-102I9 76 years, female 153.4
FF:10169-103B7 60 years, female 90.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.7
Pig sample Sample description nTPM
Subiculum
nTPM: 51.8
Samples: 4

Max nTPM: 66.0
Min nTPM: 38.5
Sample A Female 66.0
Sample B Female 57.2
Sample C Male 45.3
Sample D Male 38.5
Dorsal hippocampus
nTPM: 52.6
Samples: 4

Max nTPM: 74.7
Min nTPM: 36.2
Sample A Female 53.8
Sample B Female 45.7
Sample C Male 74.7
Sample D Male 36.2
Entorhinal cortex
nTPM: 39.6
Samples: 4

Max nTPM: 47.5
Min nTPM: 31.5
Sample A Female 38.5
Sample B Female 40.7
Sample C Male 47.5
Sample D Male 31.5
Ventral hippocampus
nTPM: 52.8
Samples: 4

Max nTPM: 67.5
Min nTPM: 38.8
Sample A Female 38.8
Sample B Female 48.4
Sample C Male 67.5
Sample D Male 56.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.8
Samples: 4

Max nTPM: 73.5
Min nTPM: 50.8
Sample A Male 60.6
Sample B Male 50.8
Sample C Female 58.4
Sample D Female 73.5
Hippocampal formation
nTPM: 50.2
Samples: 4

Max nTPM: 53.5
Min nTPM: 45.2
Sample A Male 52.2
Sample B Male 45.2
Sample C Female 49.9
Sample D Female 53.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
69608106 Antisense, RP_050426_03_E08, Mouse strain C57BL/6J (56 days, male) 5.4

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