HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:23.2 nTPM
HPA Brain:30.4 nTPM
GTEx:23.2 nTPM
FANTOM5:17.8 Scaled Tags Per Million
Pig:39.8 nTPM
Mouse:97.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003080
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.4
Sample id Sample description nTPM
Hippocampus
nTPM: 29.1
1898 Male, age 80, left hemisphere 35.2
2621 Female, age 67, right hemisphere 33.5
2148 Female, age 91, left hemisphere 28.9
1855 Male, age 76, left hemisphere 27.8
2529 Female, age 94, left hemisphere 26.9
1911 Female, age 85, right hemisphere 22.3
Dentate gyrus
nTPM: 30.4
2530 Female, age 94, left hemisphere 40.8
2010 Male, age 76, both hemispheres 30.2
2528 Male, age 74, both hemispheres 29.8
1927 Female, age 91, both hemispheres 29.4
2531 Female, age 67, both hemispheres 26.3
2246 Female, age 85, both hemispheres 25.6
Entorhinal gyrus
nTPM: 25.4
2613 Female, age 94, left hemisphere 30.3
2764 Male, age 80, right hemisphere 28.3
1938 Female, age 85, left hemisphere 25.4
2686 Male, age 75, right hemisphere 24.7
1787 Male, age 76, left hemisphere 22.4
2117 Female, age 91, right hemisphere 21.5
Hippocampus, CA1
nTPM: 27.0
2749 Male, age 80, left hemisphere 33.9
1873 Female, age 85, both hemispheres 29.7
2082 Female, age 91, right hemisphere 25.0
2527 Male, age 74, both hemispheres 24.3
2045 Male, age 76, both hemispheres 22.3
Hippocampus, CA2
nTPM: 29.1
1963 Male, age 80, left hemisphere 42.1
1892 Male, age 76, both hemispheres 31.4
2437 Female, age 94, left hemisphere 30.5
2113 Female, age 91, right hemisphere 24.0
1940 Female, age 85, left hemisphere 23.3
2249 Male, age 74, both hemispheres 23.0
Hippocampus, CA3
nTPM: 29.2
2861 Female, age 67, both hemispheres 37.4
2620 Female, age 94, left hemisphere 32.8
2436 Male, age 74, both hemispheres 27.8
1867 Male, age 76, both hemispheres 27.7
2137 Male, age 80, left hemisphere 26.7
1891 Female, age 85, both hemispheres 22.7
Parahippocampal cortex
nTPM: 24.8
1850 Male, age 80, both hemispheres 27.8
2018 Male, age 76, both hemispheres 27.5
2622 Female, age 67, right hemisphere 27.1
2693 Female, age 94, both hemispheres 26.1
2532 Female, age 72, left hemisphere 25.6
1990 Female, age 91, right hemisphere 24.5
2245 Female, age 91, both hemispheres 23.6
2250 Female, age 67, right hemisphere 22.7
2692 Male, age 74, both hemispheres 22.3
1933 Female, age 85, both hemispheres 21.1
Perirhinal gyrus
nTPM: 26.0
1794 Male, age 80, right hemisphere 27.8
2521 Female, age 94, right hemisphere 27.8
1841 Female, age 85, right hemisphere 26.3
1847 Female, age 91, left hemisphere 26.2
2848 Male, age 76, right hemisphere 21.6
Subiculum
nTPM: 23.4
1977 Female, age 85, both hemispheres 26.6
2619 Male, age 74, both hemispheres 24.8
1901 Male, age 80, both hemispheres 23.3
2438 Female, age 94, left hemisphere 22.9
2042 Male, age 76, both hemispheres 21.7
2729 Female, age 91, right hemisphere 21.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.2
Samples: 197

Max nTPM: 51.3
Min nTPM: 11.8
Std nTPM: 7.2
Median nTPM: 22.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 51.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 45.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 43.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 43.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 43.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 40.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 38.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 38.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 37.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 36.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 35.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.8
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.8
Pig sample Sample description nTPM
Subiculum
nTPM: 32.5
Samples: 4

Max nTPM: 35.9
Min nTPM: 30.4
Sample A Female 35.9
Sample B Female 32.6
Sample C Male 30.4
Sample D Male 31.2
Dorsal hippocampus
nTPM: 39.8
Samples: 4

Max nTPM: 51.8
Min nTPM: 33.5
Sample A Female 51.8
Sample B Female 39.1
Sample C Male 34.9
Sample D Male 33.5
Entorhinal cortex
nTPM: 36.8
Samples: 4

Max nTPM: 42.7
Min nTPM: 32.0
Sample A Female 34.2
Sample B Female 42.7
Sample C Male 38.4
Sample D Male 32.0
Ventral hippocampus
nTPM: 35.8
Samples: 4

Max nTPM: 42.8
Min nTPM: 29.0
Sample A Female 39.6
Sample B Female 29.0
Sample C Male 42.8
Sample D Male 31.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.2
Samples: 4

Max nTPM: 110.3
Min nTPM: 90.5
Sample A Male 90.5
Sample B Male 110.3
Sample C Female 97.5
Sample D Female 90.5
Hippocampal formation
nTPM: 91.0
Samples: 4

Max nTPM: 103.4
Min nTPM: 82.2
Sample A Male 103.4
Sample B Male 82.2
Sample C Female 92.3
Sample D Female 86.1

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