HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:25.4 nTPM
HPA Brain:37.8 nTPM
GTEx:25.4 nTPM
FANTOM5:13.4 Scaled Tags Per Million
Pig:17.8 nTPM
Mouse:17.6 nTPM
Allen mouse:31.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044968
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.8
Sample id Sample description nTPM
Hippocampus
nTPM: 28.4
1898 Male, age 80, left hemisphere 32.7
2148 Female, age 91, left hemisphere 31.2
2529 Female, age 94, left hemisphere 30.5
2621 Female, age 67, right hemisphere 28.5
1855 Male, age 76, left hemisphere 25.6
1911 Female, age 85, right hemisphere 21.7
Dentate gyrus
nTPM: 30.0
2531 Female, age 67, both hemispheres 34.2
1927 Female, age 91, both hemispheres 32.9
2010 Male, age 76, both hemispheres 29.8
2246 Female, age 85, both hemispheres 29.3
2528 Male, age 74, both hemispheres 27.0
2530 Female, age 94, left hemisphere 27.0
Entorhinal gyrus
nTPM: 30.0
1787 Male, age 76, left hemisphere 31.3
2764 Male, age 80, right hemisphere 31.2
1938 Female, age 85, left hemisphere 31.0
2686 Male, age 75, right hemisphere 31.0
2613 Female, age 94, left hemisphere 29.0
2117 Female, age 91, right hemisphere 26.2
Hippocampus, CA1
nTPM: 29.6
2045 Male, age 76, both hemispheres 44.5
1873 Female, age 85, both hemispheres 28.7
2082 Female, age 91, right hemisphere 25.6
2527 Male, age 74, both hemispheres 25.0
2749 Male, age 80, left hemisphere 24.0
Hippocampus, CA2
nTPM: 28.9
1892 Male, age 76, both hemispheres 42.5
1940 Female, age 85, left hemisphere 29.6
1963 Male, age 80, left hemisphere 28.8
2437 Female, age 94, left hemisphere 26.8
2113 Female, age 91, right hemisphere 23.9
2249 Male, age 74, both hemispheres 22.0
Hippocampus, CA3
nTPM: 32.5
2620 Female, age 94, left hemisphere 45.0
1867 Male, age 76, both hemispheres 43.4
2861 Female, age 67, both hemispheres 31.9
1891 Female, age 85, both hemispheres 29.1
2436 Male, age 74, both hemispheres 24.1
2137 Male, age 80, left hemisphere 21.7
Parahippocampal cortex
nTPM: 30.6
1850 Male, age 80, both hemispheres 37.4
1933 Female, age 85, both hemispheres 35.5
2532 Female, age 72, left hemisphere 32.3
1990 Female, age 91, right hemisphere 32.1
2693 Female, age 94, both hemispheres 31.1
2622 Female, age 67, right hemisphere 30.7
2245 Female, age 91, both hemispheres 29.0
2250 Female, age 67, right hemisphere 26.6
2018 Male, age 76, both hemispheres 25.8
2692 Male, age 74, both hemispheres 25.5
Perirhinal gyrus
nTPM: 37.8
1794 Male, age 80, right hemisphere 42.9
1847 Female, age 91, left hemisphere 40.1
1841 Female, age 85, right hemisphere 39.8
2848 Male, age 76, right hemisphere 34.9
2521 Female, age 94, right hemisphere 31.6
Subiculum
nTPM: 26.4
1977 Female, age 85, both hemispheres 29.4
2619 Male, age 74, both hemispheres 28.6
1901 Male, age 80, both hemispheres 28.0
2042 Male, age 76, both hemispheres 27.1
2729 Female, age 91, right hemisphere 27.0
2438 Female, age 94, left hemisphere 18.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.4
Samples: 197

Max nTPM: 42.3
Min nTPM: 13.0
Std nTPM: 5.3
Median nTPM: 24.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 42.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 41.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 39.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 39.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 38.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 38.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 37.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 37.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 36.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 36.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 36.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.4
FF:10153-102I9 76 years, female 14.4
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.8
Pig sample Sample description nTPM
Subiculum
nTPM: 17.2
Samples: 4

Max nTPM: 20.2
Min nTPM: 15.4
Sample A Female 20.2
Sample B Female 17.0
Sample C Male 16.3
Sample D Male 15.4
Dorsal hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 21.4
Min nTPM: 15.5
Sample A Female 18.1
Sample B Female 16.1
Sample C Male 21.4
Sample D Male 15.5
Entorhinal cortex
nTPM: 16.9
Samples: 4

Max nTPM: 18.8
Min nTPM: 13.8
Sample A Female 16.6
Sample B Female 18.8
Sample C Male 18.3
Sample D Male 13.8
Ventral hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 23.0
Min nTPM: 15.2
Sample A Female 17.2
Sample B Female 15.3
Sample C Male 23.0
Sample D Male 15.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 19.3
Min nTPM: 16.3
Sample A Male 16.3
Sample B Male 17.1
Sample C Female 17.7
Sample D Female 19.3
Hippocampal formation
nTPM: 16.7
Samples: 4

Max nTPM: 18.6
Min nTPM: 15.2
Sample A Male 18.6
Sample B Male 16.1
Sample C Female 16.7
Sample D Female 15.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 31.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 31.6
199201 Antisense, RP_040604_02_D03, Mouse strain C57BL/6J (56 days, male) 31.6

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