HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:32.6 nTPM
HPA Brain:21.4 nTPM
GTEx:32.6 nTPM
FANTOM5:15.9 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:40.9 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046755
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.4
Sample id Sample description nTPM
Hippocampus
nTPM: 13.6
1898 Male, age 80, left hemisphere 22.6
2621 Female, age 67, right hemisphere 15.0
1855 Male, age 76, left hemisphere 13.7
2529 Female, age 94, left hemisphere 10.9
1911 Female, age 85, right hemisphere 10.3
2148 Female, age 91, left hemisphere 9.3
Dentate gyrus
nTPM: 12.0
2530 Female, age 94, left hemisphere 15.6
2010 Male, age 76, both hemispheres 14.7
1927 Female, age 91, both hemispheres 11.6
2531 Female, age 67, both hemispheres 10.6
2246 Female, age 85, both hemispheres 10.2
2528 Male, age 74, both hemispheres 9.3
Entorhinal gyrus
nTPM: 18.4
2764 Male, age 80, right hemisphere 22.3
1938 Female, age 85, left hemisphere 22.0
2613 Female, age 94, left hemisphere 21.1
1787 Male, age 76, left hemisphere 20.8
2686 Male, age 75, right hemisphere 12.3
2117 Female, age 91, right hemisphere 11.9
Hippocampus, CA1
nTPM: 13.7
2749 Male, age 80, left hemisphere 23.8
1873 Female, age 85, both hemispheres 12.1
2527 Male, age 74, both hemispheres 12.0
2082 Female, age 91, right hemisphere 10.7
2045 Male, age 76, both hemispheres 10.2
Hippocampus, CA2
nTPM: 16.7
1892 Male, age 76, both hemispheres 25.4
2437 Female, age 94, left hemisphere 21.4
1963 Male, age 80, left hemisphere 14.9
1940 Female, age 85, left hemisphere 14.6
2249 Male, age 74, both hemispheres 12.6
2113 Female, age 91, right hemisphere 11.1
Hippocampus, CA3
nTPM: 13.5
1867 Male, age 76, both hemispheres 22.4
2436 Male, age 74, both hemispheres 16.8
2137 Male, age 80, left hemisphere 13.8
1891 Female, age 85, both hemispheres 11.8
2861 Female, age 67, both hemispheres 9.5
2620 Female, age 94, left hemisphere 6.6
Parahippocampal cortex
nTPM: 15.8
2250 Female, age 67, right hemisphere 21.1
1850 Male, age 80, both hemispheres 20.0
1933 Female, age 85, both hemispheres 19.8
2693 Female, age 94, both hemispheres 17.4
1990 Female, age 91, right hemisphere 16.4
2018 Male, age 76, both hemispheres 15.4
2532 Female, age 72, left hemisphere 15.1
2245 Female, age 91, both hemispheres 13.9
2692 Male, age 74, both hemispheres 11.5
2622 Female, age 67, right hemisphere 7.4
Perirhinal gyrus
nTPM: 21.4
1847 Female, age 91, left hemisphere 24.4
1794 Male, age 80, right hemisphere 23.1
2521 Female, age 94, right hemisphere 20.4
2848 Male, age 76, right hemisphere 19.9
1841 Female, age 85, right hemisphere 19.1
Subiculum
nTPM: 15.3
2438 Female, age 94, left hemisphere 21.8
1977 Female, age 85, both hemispheres 20.0
1901 Male, age 80, both hemispheres 15.7
2619 Male, age 74, both hemispheres 15.3
2042 Male, age 76, both hemispheres 11.2
2729 Female, age 91, right hemisphere 7.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.6
Samples: 197

Max nTPM: 93.2
Min nTPM: 8.2
Std nTPM: 15.5
Median nTPM: 30.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 93.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 85.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 78.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 78.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 77.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 76.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 74.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 72.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 72.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 64.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 64.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.9
FF:10153-102I9 76 years, female 19.5
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.1
Pig sample Sample description nTPM
Subiculum
nTPM: 19.0
Samples: 4

Max nTPM: 24.7
Min nTPM: 16.7
Sample A Female 24.7
Sample B Female 17.0
Sample C Male 17.7
Sample D Male 16.7
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 15.5
Min nTPM: 8.0
Sample A Female 15.5
Sample B Female 10.7
Sample C Male 14.8
Sample D Male 8.0
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 27.4
Min nTPM: 19.3
Sample A Female 21.1
Sample B Female 24.6
Sample C Male 27.4
Sample D Male 19.3
Ventral hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 19.8
Min nTPM: 10.7
Sample A Female 12.5
Sample B Female 12.8
Sample C Male 19.8
Sample D Male 10.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 34.6
Min nTPM: 30.3
Sample A Male 32.1
Sample B Male 34.4
Sample C Female 34.6
Sample D Female 30.3
Hippocampal formation
nTPM: 40.9
Samples: 4

Max nTPM: 45.4
Min nTPM: 38.8
Sample A Male 45.4
Sample B Male 39.7
Sample C Female 39.6
Sample D Female 38.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
75749421 Antisense, RP_060518_04_E05, Mouse strain C57BL/6J (56 days, male) 1.3

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