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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
396.2
nTPM
FANTOM5:
276.3
Scaled Tags Per Million
Pig:
198.7
nTPM
Allen mouse:
0.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
396.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 343.7
2301
Female, age 85, both hemispheres
457.2
2188
Female, age 91, both hemispheres
398.4
2090
Male, age 80, both hemispheres
329.6
1984
Male, age 76, both hemispheres
189.6
Dorsal cochlear nucleus nTPM: 364.3
2802
Male, age 74, right hemisphere
433.8
2378
Male, age 80, both hemispheres
387.4
2187
Female, age 91, both hemispheres
340.5
2370
Male, age 61, both hemispheres
334.0
2058
Male, age 76, both hemispheres
325.8
Dorsal tegmental nucleus nTPM: 329.8
2326
Male, age 74, both hemispheres
397.6
2083
Male, age 80, both hemispheres
333.1
1936
Male, age 76, left hemisphere
300.7
2358
Male, age 61, both hemispheres
287.9
Dorsolateral tegmental area nTPM: 307.2
2654
Male, age 80, both hemispheres
369.9
2751
Female, age 85, both hemispheres
356.8
2337
Male, age 61, both hemispheres
325.7
2360
Male, age 74, both hemispheres
263.9
2141
Male, age 76, both hemispheres
219.9
Kolliker-Fuse nucleus nTPM: 320.2
2793
Female, age 91, left hemisphere
372.0
2163
Male, age 80, both hemispheres
312.8
2315
Male, age 76, right hemisphere
275.7
Lateral lemniscal nuclei nTPM: 316.0
2320
Female, age 91, left hemisphere
366.5
2036
Male, age 80, both hemispheres
346.2
2453
Male, age 74, right hemisphere
320.6
2169
Male, age 76, both hemispheres
287.8
2746
Female, age 85, left hemisphere
259.0
Lateral parabrachial nucleus nTPM: 336.5
2792
Male, age 76, both hemispheres
442.9
2013
Male, age 80, both hemispheres
356.5
2790
Male, age 61, both hemispheres
315.2
2139
Female, age 85, right hemisphere
231.3
Lateral vestibular nucleus nTPM: 321.3
2311
Male, age 80, both hemispheres
352.5
2184
Male, age 76, both hemispheres
290.1
Locus coeruleus nTPM: 235.1
2720
Male, age 74, both hemispheres
333.3
2162
Male, age 80, both hemispheres
280.6
2014
Male, age 55, unknown
223.0
2317
Female, age 72, unknown
221.8
2788
Male, age 74, unknown
220.4
1980
Male, age 76, both hemispheres
186.7
2123
Female, age 91, both hemispheres
180.3
Medial parabrachial nucleus nTPM: 307.3
2854
Male, age 80, both hemispheres
329.8
2170
Female, age 91, both hemispheres
325.7
2786
Male, age 76, both hemispheres
311.3
2156
Male, age 61, both hemispheres
303.9
2463
Female, age 85, right hemisphere
265.9
Medial periolivary nuclei nTPM: 296.0
2458
Female, age 91, both hemispheres
371.2
2081
Male, age 80, both hemispheres
353.9
2063
Male, age 76, both hemispheres
279.7
2171
Female, age 85, both hemispheres
237.5
2791
Male, age 74, right hemisphere
237.5
Motor facial nucleus nTPM: 311.2
2697
Female, age 85, both hemispheres
391.2
2327
Male, age 80, both hemispheres
340.0
2795
Female, age 91, both hemispheres
331.0
2126
Male, age 61, both hemispheres
293.3
2365
Male, age 74, right hemisphere
271.1
2062
Male, age 76, both hemispheres
240.9
Motor trigeminal nucleus nTPM: 316.2
2321
Female, age 91, both hemispheres
356.2
2309
Male, age 76, both hemispheres
330.5
2335
Male, age 61, both hemispheres
311.2
2560
Male, age 74, both hemispheres
303.2
2079
Male, age 80, both hemispheres
280.1
Nuclei of the trapezoid body nTPM: 292.7
2368
Female, age 91, both hemispheres
345.6
2166
Male, age 80, both hemispheres
328.1
2159
Male, age 61, both hemispheres
293.6
1983
Male, age 76, both hemispheres
272.1
2735
Female, age 85, both hemispheres
224.0
Nucleus raphe magnus nTPM: 292.5
2459
Female, age 91, both hemispheres
376.9
2328
Male, age 80, both hemispheres
345.8
2051
Male, age 76, both hemispheres
336.1
2455
Male, age 74, both hemispheres
256.5
2160
Male, age 61, both hemispheres
222.7
2172
Female, age 85, both hemispheres
216.7
Paramedian reticular nucleus nTPM: 340.8
2052
Male, age 76, both hemispheres
443.5
2313
Male, age 61, both hemispheres
329.5
2057
Male, age 80, both hemispheres
301.1
2050
Female, age 85, both hemispheres
289.1
Pedunculopontine tegmental nucleus nTPM: 341.4
2334
Male, age 80, both hemispheres
378.6
2338
Male, age 61, both hemispheres
371.4
1921
Female, age 85, both hemispheres
274.1
Pontine nuclei nTPM: 315.8
2319
Female, age 91, both hemispheres
443.6
2454
Male, age 74, left hemisphere
382.5
2115
Male, age 80, left hemisphere
317.6
1968
Male, age 76, left hemisphere
311.3
1863
Male, age 55, unknown
307.8
2109
Female, age 72, unknown
292.4
2727
Male, age 61, right hemisphere
274.1
2787
Female, age 85, both hemispheres
196.8
Pontine raphe nucleus nTPM: 276.5
2122
Female, age 85, midline
303.3
2853
Male, age 76, midline
249.7
Posteroventral cochlear nucleus nTPM: 396.2
2341
Male, age 80, both hemispheres
476.3
2135
Female, age 91, both hemispheres
455.2
2371
Male, age 61, both hemispheres
432.7
2070
Male, age 76, both hemispheres
311.0
2752
Female, age 85, both hemispheres
306.0
Principal sensory trigeminal nucleus nTPM: 284.7
2367
Female, age 91, left hemisphere
361.6
2324
Male, age 76, both hemispheres
309.0
2008
Male, age 80, left hemisphere
236.0
2158
Male, age 61, both hemispheres
232.3
Reticular pontine nucleus, caudal nTPM: 348.0
2457
Female, age 91, both hemispheres
419.4
2559
Male, age 74, both hemispheres
354.9
2332
Male, age 80, right hemisphere
327.5
2092
Male, age 76, both hemispheres
290.1
Reticular pontine nucleus, oral nTPM: 342.8
2366
Female, age 91, both hemispheres
459.1
1939
Male, age 80, both hemispheres
361.5
2167
Male, age 76, both hemispheres
329.1
2012
Female, age 85, both hemispheres
285.2
2361
Male, age 74, both hemispheres
278.9
Reticulotegmental nucleus nTPM: 354.4
2452
Male, age 74, both hemispheres
407.6
2322
Female, age 91, both hemispheres
389.8
2333
Male, age 80, both hemispheres
356.2
2325
Male, age 76, both hemispheres
263.8
Spinal trigeminal nucleus, oral nTPM: 291.9
2164
Male, age 80, both hemispheres
337.2
1978
Male, age 76, both hemispheres
295.3
2737
Female, age 85, both hemispheres
243.4
Subcoeruleus area nTPM: 336.3
2369
Female, age 85, left hemisphere
409.4
2451
Male, age 74, both hemispheres
399.2
1958
Male, age 80, both hemispheres
307.2
2323
Female, age 91, left hemisphere
295.1
2089
Male, age 76, left hemisphere
270.5
Superior olive nTPM: 314.0
2020
Male, age 76, both hemispheres
376.8
2329
Male, age 80, right hemisphere
339.3
2561
Female, age 91, both hemispheres
331.1
1875
Female, age 85, both hemispheres
265.4
2364
Male, age 74, right hemisphere
257.4
Ventral periolivary nuclei nTPM: 292.6
2023
Male, age 76, both hemispheres
371.9
2794
Female, age 91, left hemisphere
300.1
2165
Male, age 80, both hemispheres
278.0
2130
Female, age 85, both hemispheres
220.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 320.4
2456
Female, age 91, both hemispheres
364.4
2161
Male, age 80, both hemispheres
359.2
2840
Female, age 85, both hemispheres
335.4
2359
Male, age 61, both hemispheres
299.7
1959
Male, age 76, both hemispheres
297.1
2449
Male, age 74, both hemispheres
266.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
198.7
Pig sample
Sample description
nTPM
Pons nTPM: 198.7
Samples: 4
Max nTPM: 226.4
Min nTPM: 172.9
Sample A
Female
196.5
Sample B
Female
172.9
Sample C
Male
226.4
Sample D
Male
198.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
