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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1099.7
nTPM
FANTOM5:
1845.1
Scaled Tags Per Million
Pig:
1150.0
nTPM
Mouse:
2000.8
nTPM
WHITE MATTER - HPA Brain RNA-seq
Max nTPM
1099.7
Sample id
Sample description
nTPM
Angular gyrus (white matter) nTPM: 669.1
1920
Male, age 76, both hemispheres
669.1
Anterior funiculus (white matter) nTPM: 957.1
2193
Male, age 75, both hemispheres
1216.3
2819
Male, age 47, both hemispheres
1008.7
2818
Female, age 79, both hemispheres
856.2
2734
Male, age 80, both hemispheres
747.2
Area striata (white matter) nTPM: 581.6
2258
Female, age 91, left hemisphere
581.6
Cerebellar white matter nTPM: 746.3
2105
Male, age 74, right hemisphere
954.7
2773
Female, age 85, right hemisphere
821.0
2174
Male, age 61, right hemisphere
766.2
1931
Female, age 91, left hemisphere
697.7
1837
Male, age 76, left hemisphere
667.8
1864
Male, age 80, left hemisphere
570.4
Corpus callosum, genu (white matter) nTPM: 671.3
2771
Male, age 75, left hemisphere
876.6
1886
Female, age 67, right hemisphere
759.8
1887
Male, age 76, left hemisphere
691.0
1934
Male, age 61, right hemisphere
654.0
1885
Female, age 94, left hemisphere
527.4
1849
Female, age 91, right hemisphere
519.1
Corpus callosum, splenium (white matter) nTPM: 783.0
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.