HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:4.7 nTPM
HPA Brain:25.1 nTPM
GTEx:4.7 nTPM
FANTOM5:57.5 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:16.9 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047677
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.1
Sample id Sample description nTPM
Hippocampus
nTPM: 24.6
2529 Female, age 94, left hemisphere 28.5
1855 Male, age 76, left hemisphere 26.1
1911 Female, age 85, right hemisphere 24.3
2148 Female, age 91, left hemisphere 24.0
2621 Female, age 67, right hemisphere 22.6
1898 Male, age 80, left hemisphere 22.2
Dentate gyrus
nTPM: 23.2
2528 Male, age 74, both hemispheres 24.9
2246 Female, age 85, both hemispheres 24.7
2530 Female, age 94, left hemisphere 23.6
2531 Female, age 67, both hemispheres 22.6
2010 Male, age 76, both hemispheres 21.9
1927 Female, age 91, both hemispheres 21.5
Entorhinal gyrus
nTPM: 24.3
2117 Female, age 91, right hemisphere 31.4
2764 Male, age 80, right hemisphere 25.8
2686 Male, age 75, right hemisphere 24.1
1787 Male, age 76, left hemisphere 22.5
1938 Female, age 85, left hemisphere 22.0
2613 Female, age 94, left hemisphere 19.7
Hippocampus, CA1
nTPM: 25.1
2527 Male, age 74, both hemispheres 28.2
2749 Male, age 80, left hemisphere 26.8
2045 Male, age 76, both hemispheres 23.8
2082 Female, age 91, right hemisphere 23.8
1873 Female, age 85, both hemispheres 23.0
Hippocampus, CA2
nTPM: 22.3
2249 Male, age 74, both hemispheres 24.8
2113 Female, age 91, right hemisphere 24.4
1963 Male, age 80, left hemisphere 24.2
1940 Female, age 85, left hemisphere 21.7
2437 Female, age 94, left hemisphere 21.5
1892 Male, age 76, both hemispheres 17.3
Hippocampus, CA3
nTPM: 22.8
2436 Male, age 74, both hemispheres 24.5
1891 Female, age 85, both hemispheres 23.7
2620 Female, age 94, left hemisphere 23.6
2137 Male, age 80, left hemisphere 23.4
2861 Female, age 67, both hemispheres 23.1
1867 Male, age 76, both hemispheres 18.4
Parahippocampal cortex
nTPM: 23.0
2250 Female, age 67, right hemisphere 26.0
2692 Male, age 74, both hemispheres 24.4
1933 Female, age 85, both hemispheres 24.2
2532 Female, age 72, left hemisphere 23.7
2245 Female, age 91, both hemispheres 23.3
2622 Female, age 67, right hemisphere 22.6
1990 Female, age 91, right hemisphere 22.1
2018 Male, age 76, both hemispheres 22.1
2693 Female, age 94, both hemispheres 21.6
1850 Male, age 80, both hemispheres 20.5
Perirhinal gyrus
nTPM: 21.4
1847 Female, age 91, left hemisphere 22.3
2521 Female, age 94, right hemisphere 21.8
1794 Male, age 80, right hemisphere 21.6
2848 Male, age 76, right hemisphere 21.3
1841 Female, age 85, right hemisphere 20.0
Subiculum
nTPM: 23.7
2729 Female, age 91, right hemisphere 25.5
2619 Male, age 74, both hemispheres 24.9
1977 Female, age 85, both hemispheres 24.3
2042 Male, age 76, both hemispheres 23.9
1901 Male, age 80, both hemispheres 23.6
2438 Female, age 94, left hemisphere 20.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.7
Samples: 197

Max nTPM: 7.1
Min nTPM: 2.5
Std nTPM: 0.8
Median nTPM: 4.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 7.1
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 6.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 6.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 6.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 6.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 6.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 6.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 6.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 6.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 6.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 6.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.5
FF:10153-102I9 76 years, female 57.8
FF:10169-103B7 60 years, female 57.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.6
Sample A Female 20.2
Sample B Female 18.6
Sample C Male 19.0
Sample D Male 17.6
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 19.7
Min nTPM: 16.5
Sample A Female 19.1
Sample B Female 16.5
Sample C Male 19.7
Sample D Male 17.4
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 19.4
Min nTPM: 14.2
Sample A Female 15.4
Sample B Female 16.1
Sample C Male 19.4
Sample D Male 14.2
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 25.8
Min nTPM: 14.6
Sample A Female 19.0
Sample B Female 14.6
Sample C Male 25.8
Sample D Male 14.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.9
Samples: 4

Max nTPM: 21.2
Min nTPM: 14.0
Sample A Male 15.4
Sample B Male 14.0
Sample C Female 17.1
Sample D Female 21.2
Hippocampal formation
nTPM: 16.3
Samples: 4

Max nTPM: 17.8
Min nTPM: 14.6
Sample A Male 14.6
Sample B Male 17.1
Sample C Female 17.8
Sample D Female 15.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
74581430 Antisense, RP_060220_04_G11, Mouse strain C57BL/6J (56 days, male) 1.2
80514147 Antisense, RP_080505_04_H06, Mouse strain C57BL/6J (56 days, male) 0.2

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