HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.3 nTPM
HPA Brain:32.6 nTPM
GTEx:12.3 nTPM
FANTOM5:18.2 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:11.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.6
Sample id Sample description nTPM
Hippocampus
nTPM: 28.6
2529 Female, age 94, left hemisphere 36.8
1911 Female, age 85, right hemisphere 30.3
1855 Male, age 76, left hemisphere 27.1
2621 Female, age 67, right hemisphere 26.9
1898 Male, age 80, left hemisphere 26.0
2148 Female, age 91, left hemisphere 24.7
Dentate gyrus
nTPM: 28.0
2530 Female, age 94, left hemisphere 36.8
2528 Male, age 74, both hemispheres 35.6
2010 Male, age 76, both hemispheres 29.8
2246 Female, age 85, both hemispheres 23.8
2531 Female, age 67, both hemispheres 23.5
1927 Female, age 91, both hemispheres 18.8
Entorhinal gyrus
nTPM: 24.5
2117 Female, age 91, right hemisphere 35.5
1787 Male, age 76, left hemisphere 28.9
2686 Male, age 75, right hemisphere 24.0
2764 Male, age 80, right hemisphere 22.5
1938 Female, age 85, left hemisphere 18.8
2613 Female, age 94, left hemisphere 17.7
Hippocampus, CA1
nTPM: 24.3
2527 Male, age 74, both hemispheres 29.2
2045 Male, age 76, both hemispheres 27.5
1873 Female, age 85, both hemispheres 26.9
2082 Female, age 91, right hemisphere 23.3
2749 Male, age 80, left hemisphere 14.4
Hippocampus, CA2
nTPM: 28.9
2249 Male, age 74, both hemispheres 36.3
1940 Female, age 85, left hemisphere 35.5
2437 Female, age 94, left hemisphere 29.9
2113 Female, age 91, right hemisphere 25.9
1963 Male, age 80, left hemisphere 23.3
1892 Male, age 76, both hemispheres 22.8
Hippocampus, CA3
nTPM: 26.1
2436 Male, age 74, both hemispheres 33.4
1867 Male, age 76, both hemispheres 33.2
1891 Female, age 85, both hemispheres 26.9
2861 Female, age 67, both hemispheres 26.5
2620 Female, age 94, left hemisphere 23.2
2137 Male, age 80, left hemisphere 13.2
Parahippocampal cortex
nTPM: 21.7
2018 Male, age 76, both hemispheres 36.9
2692 Male, age 74, both hemispheres 27.0
2532 Female, age 72, left hemisphere 23.4
1990 Female, age 91, right hemisphere 23.1
2250 Female, age 67, right hemisphere 21.5
2245 Female, age 91, both hemispheres 20.3
2622 Female, age 67, right hemisphere 17.4
1933 Female, age 85, both hemispheres 16.7
1850 Male, age 80, both hemispheres 16.5
2693 Female, age 94, both hemispheres 14.6
Perirhinal gyrus
nTPM: 16.1
2848 Male, age 76, right hemisphere 21.6
2521 Female, age 94, right hemisphere 17.0
1794 Male, age 80, right hemisphere 16.2
1847 Female, age 91, left hemisphere 14.3
1841 Female, age 85, right hemisphere 11.4
Subiculum
nTPM: 32.6
2042 Male, age 76, both hemispheres 46.1
2729 Female, age 91, right hemisphere 34.2
2438 Female, age 94, left hemisphere 32.1
2619 Male, age 74, both hemispheres 30.8
1901 Male, age 80, both hemispheres 29.3
1977 Female, age 85, both hemispheres 23.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.3
Samples: 197

Max nTPM: 42.9
Min nTPM: 2.8
Std nTPM: 6.4
Median nTPM: 11.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 42.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 42.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 36.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 33.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 29.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 29.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 28.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 28.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 25.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 24.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 24.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.2
FF:10153-102I9 76 years, female 26.1
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Subiculum
nTPM: 8.7
Samples: 4

Max nTPM: 9.1
Min nTPM: 8.2
Sample A Female 8.7
Sample B Female 8.2
Sample C Male 8.7
Sample D Male 9.1
Dorsal hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 13.0
Min nTPM: 5.2
Sample A Female 8.6
Sample B Female 7.1
Sample C Male 13.0
Sample D Male 5.2
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 6.8
Min nTPM: 3.4
Sample A Female 6.8
Sample B Female 3.4
Sample C Male 4.9
Sample D Male 3.5
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 12.2
Min nTPM: 6.2
Sample A Female 8.6
Sample B Female 6.2
Sample C Male 12.2
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.2
Sample A Male 9.7
Sample B Male 8.6
Sample C Female 7.2
Sample D Female 7.6
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.1
Sample A Male 10.1
Sample B Male 13.1
Sample C Female 13.2
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
77932787 Antisense, RP_070320_02_B01, Mouse strain C57BL/6J (56 days, male) 0.3

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