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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
95.1
nTPM
HPA Brain:
54.8
nTPM
GTEx:
95.1
nTPM
FANTOM5:
93.7
Scaled Tags Per Million
Pig:
7.6
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
54.8
Sample id
Sample description
nTPM
Amygdala nTPM: 38.9
1987
Female, age 91, left hemisphere
53.7
2517
Female, age 94, left hemisphere
52.7
2514
Male, age 75, right hemisphere
38.1
2814
Male, age 76, right hemisphere
32.1
2695
Female, age 67, right hemisphere
17.7
Basal amygdala nTPM: 47.2
2243
Female, age 91, right hemisphere
80.2
2110
Male, age 80, left hemisphere
57.2
2685
Female, age 94, left hemisphere
56.1
1955
Male, age 76, both hemispheres
33.6
2609
Male, age 75, right hemisphere
28.8
2827
Female, age 67, right hemisphere
27.0
Central amygdala nTPM: 45.1
2239
Male, age 80, left hemisphere
64.9
2701
Female, age 91, right hemisphere
52.5
2826
Female, age 94, left hemisphere
51.4
2515
Male, age 75, right hemisphere
31.4
1905
Male, age 76, both hemispheres
25.4
Corticomedial amygdala nTPM: 54.8
2242
Female, age 91, right hemisphere
92.7
2829
Male, age 80, left hemisphere
60.6
2429
Female, age 94, left hemisphere
58.5
2535
Female, age 67, right hemisphere
51.9
2240
Male, age 76, both hemispheres
36.5
2428
Male, age 75, right hemisphere
28.6
Lateral amygdala nTPM: 39.2
2534
Female, age 94, left hemisphere
71.9
2255
Female, age 91, right hemisphere
46.2
2256
Male, age 80, left hemisphere
33.2
1883
Male, age 76, both hemispheres
32.2
2516
Male, age 75, right hemisphere
32.0
2830
Female, age 67, right hemisphere
19.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
95.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 95.1
Samples: 152
Max nTPM: 352.9
Min nTPM: 18.2
Std nTPM: 57.2
Median nTPM: 78.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
352.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
322.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
322.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
236.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
232.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
210.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
199.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
193.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
190.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
186.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
177.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
175.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
173.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
169.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
166.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
166.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
159.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
157.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
148.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
147.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
144.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
143.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
142.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
141.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
140.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
137.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
136.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
136.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
135.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
131.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
131.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
131.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
131.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
129.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
128.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
127.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
125.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
124.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
123.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
121.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
121.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
121.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
118.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
117.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
115.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
114.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
114.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
114.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
114.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
114.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
113.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
111.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
110.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
109.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
108.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
108.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
107.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
105.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
103.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
103.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
100.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
99.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
95.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
94.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
91.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
91.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
88.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
87.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
86.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
85.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
85.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
84.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
83.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
81.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
81.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
78.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
77.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
77.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
76.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
74.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
73.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
71.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
71.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
71.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
70.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
70.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
69.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
68.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
68.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
68.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
68.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
68.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
67.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
67.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
66.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
66.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
66.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
65.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
64.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
64.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
64.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
64.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
64.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
63.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
62.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
62.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
61.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
61.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
59.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
59.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
58.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
58.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
58.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
57.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
56.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
56.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
52.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
52.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
51.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
51.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
51.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
50.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
49.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
48.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
46.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
45.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
44.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
42.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
42.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
41.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
41.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
41.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
40.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
40.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
39.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
38.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
37.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
37.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
37.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
36.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
32.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
32.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
31.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
31.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
31.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
30.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
30.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
27.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
26.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
23.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
19.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
18.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.