HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:84.4 nTPM
HPA Brain:69.6 nTPM
GTEx:84.4 nTPM
FANTOM5:163.8 Scaled Tags Per Million
Pig:9.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059058
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.6
Sample id Sample description nTPM
Hippocampus
nTPM: 51.6
1898 Male, age 80, left hemisphere 78.4
2621 Female, age 67, right hemisphere 63.6
1855 Male, age 76, left hemisphere 44.3
2529 Female, age 94, left hemisphere 43.5
2148 Female, age 91, left hemisphere 41.2
1911 Female, age 85, right hemisphere 38.5
Dentate gyrus
nTPM: 55.9
2530 Female, age 94, left hemisphere 68.6
1927 Female, age 91, both hemispheres 61.1
2246 Female, age 85, both hemispheres 60.1
2010 Male, age 76, both hemispheres 59.1
2531 Female, age 67, both hemispheres 44.2
2528 Male, age 74, both hemispheres 42.4
Entorhinal gyrus
nTPM: 51.2
1938 Female, age 85, left hemisphere 64.2
2613 Female, age 94, left hemisphere 63.9
2764 Male, age 80, right hemisphere 59.4
1787 Male, age 76, left hemisphere 48.1
2686 Male, age 75, right hemisphere 42.9
2117 Female, age 91, right hemisphere 28.6
Hippocampus, CA1
nTPM: 65.2
2749 Male, age 80, left hemisphere 102.2
2527 Male, age 74, both hemispheres 73.3
1873 Female, age 85, both hemispheres 56.0
2045 Male, age 76, both hemispheres 50.8
2082 Female, age 91, right hemisphere 43.8
Hippocampus, CA2
nTPM: 60.3
1892 Male, age 76, both hemispheres 80.3
2437 Female, age 94, left hemisphere 75.1
1963 Male, age 80, left hemisphere 69.4
2249 Male, age 74, both hemispheres 59.5
1940 Female, age 85, left hemisphere 41.3
2113 Female, age 91, right hemisphere 36.4
Hippocampus, CA3
nTPM: 53.6
2137 Male, age 80, left hemisphere 65.9
1867 Male, age 76, both hemispheres 62.5
2436 Male, age 74, both hemispheres 58.2
2861 Female, age 67, both hemispheres 45.3
1891 Female, age 85, both hemispheres 45.0
2620 Female, age 94, left hemisphere 44.6
Parahippocampal cortex
nTPM: 61.1
2245 Female, age 91, both hemispheres 93.0
2250 Female, age 67, right hemisphere 85.5
2532 Female, age 72, left hemisphere 69.3
1933 Female, age 85, both hemispheres 63.3
1990 Female, age 91, right hemisphere 63.0
1850 Male, age 80, both hemispheres 58.1
2693 Female, age 94, both hemispheres 50.0
2018 Male, age 76, both hemispheres 48.5
2622 Female, age 67, right hemisphere 41.3
2692 Male, age 74, both hemispheres 38.8
Perirhinal gyrus
nTPM: 69.6
2521 Female, age 94, right hemisphere 92.2
1847 Female, age 91, left hemisphere 80.5
1841 Female, age 85, right hemisphere 66.9
1794 Male, age 80, right hemisphere 57.0
2848 Male, age 76, right hemisphere 51.4
Subiculum
nTPM: 51.6
2438 Female, age 94, left hemisphere 79.4
1977 Female, age 85, both hemispheres 69.2
1901 Male, age 80, both hemispheres 51.6
2619 Male, age 74, both hemispheres 42.7
2042 Male, age 76, both hemispheres 40.1
2729 Female, age 91, right hemisphere 26.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 84.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 84.4
Samples: 197

Max nTPM: 268.3
Min nTPM: 10.9
Std nTPM: 54.1
Median nTPM: 74.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 268.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 249.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 223.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 219.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 218.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 215.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 211.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 204.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 201.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 200.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 196.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 163.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 163.8
FF:10169-103B7 60 years, female 254.4
FF:10153-102I9 76 years, female 73.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.0
Pig sample Sample description nTPM
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 12.3
Min nTPM: 5.9
Sample A Female 12.3
Sample B Female 10.2
Sample C Male 7.6
Sample D Male 5.9
Dorsal hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 5.5
Min nTPM: 4.2
Sample A Female 5.5
Sample B Female 5.5
Sample C Male 4.5
Sample D Male 4.2
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.9
Sample A Female 6.9
Sample B Female 7.7
Sample C Male 8.1
Sample D Male 7.1
Ventral hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 10.5
Min nTPM: 3.3
Sample A Female 10.0
Sample B Female 6.4
Sample C Male 10.5
Sample D Male 3.3

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