HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:83.5 nTPM
HPA Brain:292.8 nTPM
GTEx:83.5 nTPM
FANTOM5:262.7 Scaled Tags Per Million
Pig:235.5 nTPM
Mouse:586.3 nTPM
Allen mouse:23.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035715
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 292.8
Sample id Sample description nTPM
Hippocampus
nTPM: 222.5
1898 Male, age 80, left hemisphere 289.7
2148 Female, age 91, left hemisphere 255.9
1855 Male, age 76, left hemisphere 252.4
2621 Female, age 67, right hemisphere 239.5
1911 Female, age 85, right hemisphere 196.0
2529 Female, age 94, left hemisphere 101.4
Dentate gyrus
nTPM: 261.5
1927 Female, age 91, both hemispheres 493.9
2531 Female, age 67, both hemispheres 316.6
2010 Male, age 76, both hemispheres 259.9
2246 Female, age 85, both hemispheres 211.7
2528 Male, age 74, both hemispheres 146.5
2530 Female, age 94, left hemisphere 140.5
Entorhinal gyrus
nTPM: 144.6
1938 Female, age 85, left hemisphere 209.3
2764 Male, age 80, right hemisphere 175.1
2613 Female, age 94, left hemisphere 162.0
1787 Male, age 76, left hemisphere 159.5
2686 Male, age 75, right hemisphere 89.1
2117 Female, age 91, right hemisphere 72.6
Hippocampus, CA1
nTPM: 292.8
2749 Male, age 80, left hemisphere 563.8
2045 Male, age 76, both hemispheres 302.9
1873 Female, age 85, both hemispheres 292.1
2527 Male, age 74, both hemispheres 171.7
2082 Female, age 91, right hemisphere 133.5
Hippocampus, CA2
nTPM: 195.1
1892 Male, age 76, both hemispheres 312.3
1963 Male, age 80, left hemisphere 287.3
2249 Male, age 74, both hemispheres 168.0
1940 Female, age 85, left hemisphere 157.0
2113 Female, age 91, right hemisphere 139.2
2437 Female, age 94, left hemisphere 106.8
Hippocampus, CA3
nTPM: 282.8
2137 Male, age 80, left hemisphere 495.0
2620 Female, age 94, left hemisphere 368.7
1867 Male, age 76, both hemispheres 240.6
2436 Male, age 74, both hemispheres 217.2
2861 Female, age 67, both hemispheres 200.8
1891 Female, age 85, both hemispheres 174.3
Parahippocampal cortex
nTPM: 162.1
1850 Male, age 80, both hemispheres 233.4
2245 Female, age 91, both hemispheres 227.7
1990 Female, age 91, right hemisphere 198.7
2693 Female, age 94, both hemispheres 174.9
2018 Male, age 76, both hemispheres 168.6
1933 Female, age 85, both hemispheres 166.0
2250 Female, age 67, right hemisphere 162.1
2532 Female, age 72, left hemisphere 130.0
2622 Female, age 67, right hemisphere 100.9
2692 Male, age 74, both hemispheres 58.5
Perirhinal gyrus
nTPM: 243.8
1847 Female, age 91, left hemisphere 344.5
2521 Female, age 94, right hemisphere 241.7
1841 Female, age 85, right hemisphere 230.8
1794 Male, age 80, right hemisphere 219.1
2848 Male, age 76, right hemisphere 182.9
Subiculum
nTPM: 149.1
1901 Male, age 80, both hemispheres 227.8
2729 Female, age 91, right hemisphere 159.8
1977 Female, age 85, both hemispheres 159.1
2438 Female, age 94, left hemisphere 155.4
2042 Male, age 76, both hemispheres 133.4
2619 Male, age 74, both hemispheres 59.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.5
Samples: 197

Max nTPM: 299.9
Min nTPM: 1.2
Std nTPM: 65.0
Median nTPM: 66.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 299.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 274.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 263.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 255.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 242.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 239.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 226.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 225.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 222.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 219.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 218.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 262.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 262.7
FF:10169-103B7 60 years, female 404.0
FF:10153-102I9 76 years, female 121.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 235.5
Pig sample Sample description nTPM
Subiculum
nTPM: 120.7
Samples: 4

Max nTPM: 166.5
Min nTPM: 98.0
Sample A Female 166.5
Sample B Female 110.7
Sample C Male 98.0
Sample D Male 107.6
Dorsal hippocampus
nTPM: 235.5
Samples: 4

Max nTPM: 293.3
Min nTPM: 117.5
Sample A Female 281.8
Sample B Female 249.5
Sample C Male 117.5
Sample D Male 293.3
Entorhinal cortex
nTPM: 120.7
Samples: 4

Max nTPM: 135.6
Min nTPM: 108.8
Sample A Female 135.6
Sample B Female 108.8
Sample C Male 128.3
Sample D Male 110.1
Ventral hippocampus
nTPM: 154.3
Samples: 4

Max nTPM: 241.4
Min nTPM: 103.7
Sample A Female 162.8
Sample B Female 103.7
Sample C Male 109.2
Sample D Male 241.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 586.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 392.0
Samples: 4

Max nTPM: 488.0
Min nTPM: 352.4
Sample A Male 352.4
Sample B Male 356.2
Sample C Female 371.3
Sample D Female 488.0
Hippocampal formation
nTPM: 586.4
Samples: 4

Max nTPM: 748.0
Min nTPM: 498.1
Sample A Male 498.1
Sample B Male 599.7
Sample C Female 748.0
Sample D Female 499.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.4
72103854 Antisense, RP_051017_03_A04, Mouse strain C57BL/6J (56 days, male) 24.1
68799004 Antisense, RP_050217_01_G11, Mouse strain C57BL/6J (56 days, male) 22.8

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