HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:379.1 nTPM
HPA Brain:507.7 nTPM
GTEx:379.1 nTPM
FANTOM5:200.9 Scaled Tags Per Million
Pig:165.9 nTPM
Mouse:753.7 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029095Antibody HPA063885Antibody CAB016120
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 507.7
Sample id Sample description nTPM
Hippocampus
nTPM: 371.5
2621 Female, age 67, right hemisphere 512.0
2148 Female, age 91, left hemisphere 432.4
2529 Female, age 94, left hemisphere 398.7
1911 Female, age 85, right hemisphere 348.1
1898 Male, age 80, left hemisphere 301.6
1855 Male, age 76, left hemisphere 236.3
Dentate gyrus
nTPM: 366.2
2531 Female, age 67, both hemispheres 636.5
1927 Female, age 91, both hemispheres 495.9
2246 Female, age 85, both hemispheres 296.0
2528 Male, age 74, both hemispheres 271.0
2530 Female, age 94, left hemisphere 262.3
2010 Male, age 76, both hemispheres 235.4
Entorhinal gyrus
nTPM: 415.8
2613 Female, age 94, left hemisphere 658.1
2764 Male, age 80, right hemisphere 426.0
2686 Male, age 75, right hemisphere 424.5
1787 Male, age 76, left hemisphere 392.0
1938 Female, age 85, left hemisphere 371.0
2117 Female, age 91, right hemisphere 223.5
Hippocampus, CA1
nTPM: 376.5
2749 Male, age 80, left hemisphere 508.1
2527 Male, age 74, both hemispheres 428.5
2045 Male, age 76, both hemispheres 360.1
2082 Female, age 91, right hemisphere 303.3
1873 Female, age 85, both hemispheres 282.7
Hippocampus, CA2
nTPM: 312.7
1963 Male, age 80, left hemisphere 367.1
2113 Female, age 91, right hemisphere 335.6
2437 Female, age 94, left hemisphere 326.9
1892 Male, age 76, both hemispheres 324.6
1940 Female, age 85, left hemisphere 276.0
2249 Male, age 74, both hemispheres 245.9
Hippocampus, CA3
nTPM: 452.2
2620 Female, age 94, left hemisphere 693.1
2861 Female, age 67, both hemispheres 548.0
2137 Male, age 80, left hemisphere 529.4
1867 Male, age 76, both hemispheres 339.3
2436 Male, age 74, both hemispheres 323.2
1891 Female, age 85, both hemispheres 280.2
Parahippocampal cortex
nTPM: 419.8
2245 Female, age 91, both hemispheres 600.4
2622 Female, age 67, right hemisphere 514.6
1850 Male, age 80, both hemispheres 439.0
1990 Female, age 91, right hemisphere 419.2
2693 Female, age 94, both hemispheres 416.4
2692 Male, age 74, both hemispheres 382.7
2532 Female, age 72, left hemisphere 375.2
2250 Female, age 67, right hemisphere 371.8
1933 Female, age 85, both hemispheres 367.6
2018 Male, age 76, both hemispheres 311.1
Perirhinal gyrus
nTPM: 507.7
1847 Female, age 91, left hemisphere 616.9
1794 Male, age 80, right hemisphere 535.1
2521 Female, age 94, right hemisphere 527.8
1841 Female, age 85, right hemisphere 476.2
2848 Male, age 76, right hemisphere 382.3
Subiculum
nTPM: 295.8
2619 Male, age 74, both hemispheres 353.9
1977 Female, age 85, both hemispheres 315.8
1901 Male, age 80, both hemispheres 306.5
2438 Female, age 94, left hemisphere 293.2
2729 Female, age 91, right hemisphere 269.4
2042 Male, age 76, both hemispheres 236.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 379.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 379.1
Samples: 197

Max nTPM: 1148.8
Min nTPM: 21.7
Std nTPM: 236.8
Median nTPM: 346.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1148.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1050.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1021.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 984.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 917.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 916.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 914.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 890.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 852.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 838.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 818.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 200.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 200.9
FF:10153-102I9 76 years, female 213.9
FF:10169-103B7 60 years, female 187.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 165.9
Pig sample Sample description nTPM
Subiculum
nTPM: 136.5
Samples: 4

Max nTPM: 178.0
Min nTPM: 120.9
Sample A Female 178.0
Sample B Female 122.6
Sample C Male 120.9
Sample D Male 124.3
Dorsal hippocampus
nTPM: 132.1
Samples: 4

Max nTPM: 147.3
Min nTPM: 94.9
Sample A Female 147.3
Sample B Female 141.5
Sample C Male 94.9
Sample D Male 144.7
Entorhinal cortex
nTPM: 165.9
Samples: 4

Max nTPM: 183.2
Min nTPM: 149.2
Sample A Female 183.2
Sample B Female 149.2
Sample C Male 180.5
Sample D Male 150.7
Ventral hippocampus
nTPM: 124.6
Samples: 4

Max nTPM: 156.2
Min nTPM: 104.2
Sample A Female 116.8
Sample B Female 104.2
Sample C Male 156.2
Sample D Male 121.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 753.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 753.7
Samples: 4

Max nTPM: 840.6
Min nTPM: 676.7
Sample A Male 732.5
Sample B Male 764.8
Sample C Female 676.7
Sample D Female 840.6
Hippocampal formation
nTPM: 551.3
Samples: 4

Max nTPM: 617.6
Min nTPM: 517.4
Sample A Male 617.6
Sample B Male 517.4
Sample C Female 522.9
Sample D Female 547.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
958 Antisense, RP_Baylor_102973, Mouse strain C57BL/6J (56 days, male) 4.8
959 Antisense, RP_Baylor_102973, Mouse strain C57BL/6J (56 days, male) 4.4
75990859 Antisense, RP_060608_01_F09, Mouse strain C57BL/6J (56 days, male) 0.1
960 Sense, RPS_Baylor_37027, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org