HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:18.0 nTPM
HPA Brain:14.3 nTPM
GTEx:18.0 nTPM
FANTOM5:76.7 Scaled Tags Per Million
Pig:14.5 nTPM
Mouse:52.8 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003332
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.3
2621 Female, age 67, right hemisphere 16.5
1898 Male, age 80, left hemisphere 13.7
2148 Female, age 91, left hemisphere 12.9
1855 Male, age 76, left hemisphere 12.7
2529 Female, age 94, left hemisphere 12.7
1911 Female, age 85, right hemisphere 11.0
Dentate gyrus
nTPM: 12.6
2530 Female, age 94, left hemisphere 19.7
2246 Female, age 85, both hemispheres 13.3
2528 Male, age 74, both hemispheres 13.2
1927 Female, age 91, both hemispheres 10.7
2010 Male, age 76, both hemispheres 10.7
2531 Female, age 67, both hemispheres 8.2
Entorhinal gyrus
nTPM: 12.0
2764 Male, age 80, right hemisphere 15.2
1938 Female, age 85, left hemisphere 14.3
1787 Male, age 76, left hemisphere 12.2
2117 Female, age 91, right hemisphere 11.8
2613 Female, age 94, left hemisphere 9.7
2686 Male, age 75, right hemisphere 8.6
Hippocampus, CA1
nTPM: 14.3
2749 Male, age 80, left hemisphere 22.7
2527 Male, age 74, both hemispheres 13.8
1873 Female, age 85, both hemispheres 12.8
2082 Female, age 91, right hemisphere 11.5
2045 Male, age 76, both hemispheres 11.0
Hippocampus, CA2
nTPM: 13.2
1963 Male, age 80, left hemisphere 19.6
1892 Male, age 76, both hemispheres 14.9
2249 Male, age 74, both hemispheres 13.4
1940 Female, age 85, left hemisphere 11.9
2113 Female, age 91, right hemisphere 10.5
2437 Female, age 94, left hemisphere 8.9
Hippocampus, CA3
nTPM: 13.0
2137 Male, age 80, left hemisphere 17.2
1867 Male, age 76, both hemispheres 14.3
2620 Female, age 94, left hemisphere 13.9
2436 Male, age 74, both hemispheres 11.7
1891 Female, age 85, both hemispheres 11.0
2861 Female, age 67, both hemispheres 9.7
Parahippocampal cortex
nTPM: 11.8
2532 Female, age 72, left hemisphere 15.5
1850 Male, age 80, both hemispheres 14.1
1933 Female, age 85, both hemispheres 12.8
2245 Female, age 91, both hemispheres 11.6
2018 Male, age 76, both hemispheres 11.3
2250 Female, age 67, right hemisphere 11.0
1990 Female, age 91, right hemisphere 10.9
2692 Male, age 74, both hemispheres 10.9
2693 Female, age 94, both hemispheres 10.3
2622 Female, age 67, right hemisphere 9.1
Perirhinal gyrus
nTPM: 13.2
1794 Male, age 80, right hemisphere 16.2
2521 Female, age 94, right hemisphere 14.0
1841 Female, age 85, right hemisphere 12.9
1847 Female, age 91, left hemisphere 11.6
2848 Male, age 76, right hemisphere 11.2
Subiculum
nTPM: 12.5
1901 Male, age 80, both hemispheres 15.6
1977 Female, age 85, both hemispheres 15.3
2619 Male, age 74, both hemispheres 15.3
2042 Male, age 76, both hemispheres 12.6
2438 Female, age 94, left hemisphere 9.4
2729 Female, age 91, right hemisphere 6.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.0
Samples: 197

Max nTPM: 34.2
Min nTPM: 9.5
Std nTPM: 4.6
Median nTPM: 17.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 34.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 30.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 30.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 29.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 29.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 28.7
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 28.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 27.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 27.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 27.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 27.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.7
FF:10153-102I9 76 years, female 80.8
FF:10169-103B7 60 years, female 72.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.5
Pig sample Sample description nTPM
Subiculum
nTPM: 12.6
Samples: 4

Max nTPM: 16.4
Min nTPM: 10.9
Sample A Female 16.4
Sample B Female 12.0
Sample C Male 10.9
Sample D Male 11.2
Dorsal hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 15.1
Min nTPM: 10.4
Sample A Female 15.1
Sample B Female 12.2
Sample C Male 12.3
Sample D Male 10.4
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.4
Sample A Female 15.3
Sample B Female 16.2
Sample C Male 14.0
Sample D Male 12.4
Ventral hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 14.6
Min nTPM: 10.1
Sample A Female 12.5
Sample B Female 10.1
Sample C Male 14.6
Sample D Male 12.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.7
Samples: 4

Max nTPM: 40.3
Min nTPM: 29.3
Sample A Male 31.4
Sample B Male 29.3
Sample C Female 40.3
Sample D Female 33.6
Hippocampal formation
nTPM: 52.8
Samples: 4

Max nTPM: 65.0
Min nTPM: 45.6
Sample A Male 45.6
Sample B Male 50.7
Sample C Female 65.0
Sample D Female 49.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
1547 Antisense, RP_Baylor_103093, Mouse strain C57BL/6J (56 days, male) 0.8
1548 Antisense, RP_Baylor_103093, Mouse strain C57BL/6J (56 days, male) 0.6

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