HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:24.0 nTPM
HPA Brain:38.9 nTPM
GTEx:24.0 nTPM
FANTOM5:34.6 Scaled Tags Per Million
Pig:39.3 nTPM
Mouse:13.2 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061879
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.9
Sample id Sample description nTPM
Hippocampus
nTPM: 36.2
2148 Female, age 91, left hemisphere 42.0
1911 Female, age 85, right hemisphere 36.9
1855 Male, age 76, left hemisphere 36.4
2529 Female, age 94, left hemisphere 34.8
1898 Male, age 80, left hemisphere 34.4
2621 Female, age 67, right hemisphere 32.7
Dentate gyrus
nTPM: 38.9
1927 Female, age 91, both hemispheres 42.9
2531 Female, age 67, both hemispheres 42.3
2010 Male, age 76, both hemispheres 40.7
2246 Female, age 85, both hemispheres 37.8
2530 Female, age 94, left hemisphere 35.7
2528 Male, age 74, both hemispheres 33.9
Entorhinal gyrus
nTPM: 33.0
1787 Male, age 76, left hemisphere 33.6
2686 Male, age 75, right hemisphere 33.4
2764 Male, age 80, right hemisphere 33.1
2613 Female, age 94, left hemisphere 32.9
2117 Female, age 91, right hemisphere 32.6
1938 Female, age 85, left hemisphere 32.3
Hippocampus, CA1
nTPM: 38.0
1873 Female, age 85, both hemispheres 42.4
2045 Male, age 76, both hemispheres 40.7
2749 Male, age 80, left hemisphere 38.5
2082 Female, age 91, right hemisphere 37.2
2527 Male, age 74, both hemispheres 31.3
Hippocampus, CA2
nTPM: 37.8
1892 Male, age 76, both hemispheres 43.2
1963 Male, age 80, left hemisphere 41.5
2113 Female, age 91, right hemisphere 37.9
1940 Female, age 85, left hemisphere 35.6
2437 Female, age 94, left hemisphere 34.3
2249 Male, age 74, both hemispheres 34.0
Hippocampus, CA3
nTPM: 36.9
2620 Female, age 94, left hemisphere 41.9
2137 Male, age 80, left hemisphere 41.4
2861 Female, age 67, both hemispheres 37.4
1891 Female, age 85, both hemispheres 36.0
1867 Male, age 76, both hemispheres 34.7
2436 Male, age 74, both hemispheres 29.8
Parahippocampal cortex
nTPM: 34.1
2693 Female, age 94, both hemispheres 39.4
1933 Female, age 85, both hemispheres 35.9
2250 Female, age 67, right hemisphere 34.5
2622 Female, age 67, right hemisphere 34.4
1850 Male, age 80, both hemispheres 34.2
2245 Female, age 91, both hemispheres 33.7
1990 Female, age 91, right hemisphere 33.3
2692 Male, age 74, both hemispheres 32.9
2532 Female, age 72, left hemisphere 32.3
2018 Male, age 76, both hemispheres 30.7
Perirhinal gyrus
nTPM: 34.2
1841 Female, age 85, right hemisphere 38.1
2521 Female, age 94, right hemisphere 35.7
1794 Male, age 80, right hemisphere 33.9
1847 Female, age 91, left hemisphere 33.1
2848 Male, age 76, right hemisphere 30.1
Subiculum
nTPM: 36.0
2438 Female, age 94, left hemisphere 37.6
1977 Female, age 85, both hemispheres 37.5
2042 Male, age 76, both hemispheres 36.7
2729 Female, age 91, right hemisphere 36.6
1901 Male, age 80, both hemispheres 34.5
2619 Male, age 74, both hemispheres 33.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.0
Samples: 197

Max nTPM: 41.3
Min nTPM: 11.5
Std nTPM: 5.4
Median nTPM: 23.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 41.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 40.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 37.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 36.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 36.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 36.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 36.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 35.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 35.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 34.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 34.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.6
FF:10169-103B7 60 years, female 36.3
FF:10153-102I9 76 years, female 32.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.3
Pig sample Sample description nTPM
Subiculum
nTPM: 34.3
Samples: 4

Max nTPM: 39.4
Min nTPM: 31.7
Sample A Female 39.4
Sample B Female 33.6
Sample C Male 32.3
Sample D Male 31.7
Dorsal hippocampus
nTPM: 31.4
Samples: 4

Max nTPM: 32.3
Min nTPM: 29.7
Sample A Female 29.7
Sample B Female 31.3
Sample C Male 32.3
Sample D Male 32.1
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 41.5
Min nTPM: 37.9
Sample A Female 41.5
Sample B Female 38.4
Sample C Male 39.4
Sample D Male 37.9
Ventral hippocampus
nTPM: 30.0
Samples: 4

Max nTPM: 32.2
Min nTPM: 26.4
Sample A Female 26.4
Sample B Female 29.1
Sample C Male 32.2
Sample D Male 32.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.2
Sample A Male 12.6
Sample B Male 12.6
Sample C Female 12.2
Sample D Female 15.4
Hippocampal formation
nTPM: 12.2
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.0
Sample A Male 11.6
Sample B Male 12.8
Sample C Female 13.4
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
69262320 Antisense, RP_050303_01_H12, Mouse strain C57BL/6J (56 days, male) 5.5

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