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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
167.4
nTPM
FANTOM5:
153.6
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
167.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 109.6
2188
Female, age 91, both hemispheres
135.6
2090
Male, age 80, both hemispheres
120.8
2301
Female, age 85, both hemispheres
109.1
1984
Male, age 76, both hemispheres
73.1
Dorsal cochlear nucleus nTPM: 133.7
2378
Male, age 80, both hemispheres
155.4
2802
Male, age 74, right hemisphere
155.4
2370
Male, age 61, both hemispheres
136.2
2187
Female, age 91, both hemispheres
119.6
2058
Male, age 76, both hemispheres
102.0
Dorsal tegmental nucleus nTPM: 125.8
2358
Male, age 61, both hemispheres
191.6
2326
Male, age 74, both hemispheres
109.4
2083
Male, age 80, both hemispheres
104.5
1936
Male, age 76, left hemisphere
97.8
Dorsolateral tegmental area nTPM: 112.0
2337
Male, age 61, both hemispheres
188.4
2654
Male, age 80, both hemispheres
119.1
2751
Female, age 85, both hemispheres
87.8
2360
Male, age 74, both hemispheres
85.2
2141
Male, age 76, both hemispheres
79.3
Kolliker-Fuse nucleus nTPM: 167.4
2315
Male, age 76, right hemisphere
204.8
2163
Male, age 80, both hemispheres
173.1
2793
Female, age 91, left hemisphere
124.1
Lateral lemniscal nuclei nTPM: 93.7
2036
Male, age 80, both hemispheres
109.5
2320
Female, age 91, left hemisphere
101.9
2453
Male, age 74, right hemisphere
91.0
2169
Male, age 76, both hemispheres
85.5
2746
Female, age 85, left hemisphere
80.6
Lateral parabrachial nucleus nTPM: 121.6
2792
Male, age 76, both hemispheres
180.2
2790
Male, age 61, both hemispheres
136.5
2139
Female, age 85, right hemisphere
90.7
2013
Male, age 80, both hemispheres
79.0
Lateral vestibular nucleus nTPM: 99.1
2311
Male, age 80, both hemispheres
103.8
2184
Male, age 76, both hemispheres
94.5
Locus coeruleus nTPM: 72.7
2720
Male, age 74, both hemispheres
84.7
1980
Male, age 76, both hemispheres
82.9
2162
Male, age 80, both hemispheres
82.8
2317
Female, age 72, unknown
78.2
2123
Female, age 91, both hemispheres
74.6
2014
Male, age 55, unknown
61.0
2788
Male, age 74, unknown
45.2
Medial parabrachial nucleus nTPM: 118.9
2156
Male, age 61, both hemispheres
154.5
2170
Female, age 91, both hemispheres
144.2
2854
Male, age 80, both hemispheres
112.7
2786
Male, age 76, both hemispheres
101.5
2463
Female, age 85, right hemisphere
81.5
Medial periolivary nuclei nTPM: 104.7
2791
Male, age 74, right hemisphere
128.4
2458
Female, age 91, both hemispheres
118.1
2063
Male, age 76, both hemispheres
98.9
2081
Male, age 80, both hemispheres
92.6
2171
Female, age 85, both hemispheres
85.4
Motor facial nucleus nTPM: 107.0
2795
Female, age 91, both hemispheres
140.3
2126
Male, age 61, both hemispheres
121.0
2327
Male, age 80, both hemispheres
116.4
2697
Female, age 85, both hemispheres
94.3
2365
Male, age 74, right hemisphere
91.7
2062
Male, age 76, both hemispheres
78.4
Motor trigeminal nucleus nTPM: 116.2
2335
Male, age 61, both hemispheres
144.3
2560
Male, age 74, both hemispheres
141.2
2321
Female, age 91, both hemispheres
118.0
2309
Male, age 76, both hemispheres
91.8
2079
Male, age 80, both hemispheres
85.7
Nuclei of the trapezoid body nTPM: 86.5
1983
Male, age 76, both hemispheres
99.0
2166
Male, age 80, both hemispheres
91.3
2368
Female, age 91, both hemispheres
87.6
2159
Male, age 61, both hemispheres
82.2
2735
Female, age 85, both hemispheres
72.7
Nucleus raphe magnus nTPM: 96.7
2459
Female, age 91, both hemispheres
117.6
2051
Male, age 76, both hemispheres
116.0
2328
Male, age 80, both hemispheres
115.0
2455
Male, age 74, both hemispheres
95.8
2172
Female, age 85, both hemispheres
69.7
2160
Male, age 61, both hemispheres
66.1
Paramedian reticular nucleus nTPM: 91.3
2052
Male, age 76, both hemispheres
121.4
2313
Male, age 61, both hemispheres
85.0
2057
Male, age 80, both hemispheres
80.4
2050
Female, age 85, both hemispheres
78.4
Pedunculopontine tegmental nucleus nTPM: 109.3
2338
Male, age 61, both hemispheres
156.2
2334
Male, age 80, both hemispheres
103.5
1921
Female, age 85, both hemispheres
68.1
Pontine nuclei nTPM: 86.6
2319
Female, age 91, both hemispheres
117.5
1968
Male, age 76, left hemisphere
94.1
2454
Male, age 74, left hemisphere
91.7
2115
Male, age 80, left hemisphere
90.8
1863
Male, age 55, unknown
87.8
2787
Female, age 85, both hemispheres
79.0
2727
Male, age 61, right hemisphere
69.8
2109
Female, age 72, unknown
62.0
Pontine raphe nucleus nTPM: 81.6
2853
Male, age 76, midline
84.4
2122
Female, age 85, midline
78.9
Posteroventral cochlear nucleus nTPM: 121.8
2135
Female, age 91, both hemispheres
155.2
2341
Male, age 80, both hemispheres
145.7
2371
Male, age 61, both hemispheres
116.2
2070
Male, age 76, both hemispheres
112.3
2752
Female, age 85, both hemispheres
79.4
Principal sensory trigeminal nucleus nTPM: 89.6
2324
Male, age 76, both hemispheres
104.3
2367
Female, age 91, left hemisphere
97.9
2008
Male, age 80, left hemisphere
84.1
2158
Male, age 61, both hemispheres
72.2
Reticular pontine nucleus, caudal nTPM: 104.9
2092
Male, age 76, both hemispheres
128.8
2332
Male, age 80, right hemisphere
106.9
2559
Male, age 74, both hemispheres
95.5
2457
Female, age 91, both hemispheres
88.4
Reticular pontine nucleus, oral nTPM: 93.9
2366
Female, age 91, both hemispheres
110.3
1939
Male, age 80, both hemispheres
98.3
2361
Male, age 74, both hemispheres
92.5
2167
Male, age 76, both hemispheres
92.0
2012
Female, age 85, both hemispheres
76.3
Reticulotegmental nucleus nTPM: 115.7
2333
Male, age 80, both hemispheres
135.8
2322
Female, age 91, both hemispheres
128.5
2452
Male, age 74, both hemispheres
110.8
2325
Male, age 76, both hemispheres
87.6
Spinal trigeminal nucleus, oral nTPM: 138.8
2737
Female, age 85, both hemispheres
183.1
2164
Male, age 80, both hemispheres
144.3
1978
Male, age 76, both hemispheres
89.1
Subcoeruleus area nTPM: 100.2
2451
Male, age 74, both hemispheres
138.1
2323
Female, age 91, left hemisphere
100.1
1958
Male, age 80, both hemispheres
91.7
2369
Female, age 85, left hemisphere
87.1
2089
Male, age 76, left hemisphere
84.1
Superior olive nTPM: 112.9
2364
Male, age 74, right hemisphere
140.5
2329
Male, age 80, right hemisphere
123.4
2561
Female, age 91, both hemispheres
116.5
2020
Male, age 76, both hemispheres
107.5
1875
Female, age 85, both hemispheres
76.6
Ventral periolivary nuclei nTPM: 110.0
2794
Female, age 91, left hemisphere
124.7
2023
Male, age 76, both hemispheres
118.7
2165
Male, age 80, both hemispheres
102.0
2130
Female, age 85, both hemispheres
94.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 117.5
2359
Male, age 61, both hemispheres
153.0
2161
Male, age 80, both hemispheres
121.6
2456
Female, age 91, both hemispheres
121.4
1959
Male, age 76, both hemispheres
119.0
2840
Female, age 85, both hemispheres
108.5
2449
Male, age 74, both hemispheres
81.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
