HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		73.143
Protein expressioni No data
RNA expressioni
Consensus:56.6 nTPM
HPA Brain:279.2 nTPM
GTEx:56.6 nTPM
FANTOM5:89.4 Scaled Tags Per Million
Pig:106.8 nTPM
Mouse:213.7 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079022
Hippocampal formation mean intensity 73.143
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 47.605
Molecular layer of the dentate gyrus 64.801
Granular dentate gyrus 41.598
CA1 - oriens layer 63.938
CA1 - pyramidal layer 55.219
CA1 - radiatum layer 64.033
CA2 - oriens layer 68.685
CA2 - pyramidal layer 60.479
CA2 - radiatum layer 66.428
CA3 - oriens layer 70.636
CA3 - pyramidal layer 63.303
CA3 - radiatum layer 67.630
Stratum lucidum 55.204
Lacunosum moleculare 55.970
Subiculum 42.006

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 279.2
Sample id Sample description nTPM
Hippocampus
nTPM: 198.8
2621 Female, age 67, right hemisphere 285.1
1855 Male, age 76, left hemisphere 227.1
1898 Male, age 80, left hemisphere 201.5
2148 Female, age 91, left hemisphere 196.9
1911 Female, age 85, right hemisphere 170.8
2529 Female, age 94, left hemisphere 111.6
Dentate gyrus
nTPM: 214.9
2531 Female, age 67, both hemispheres 351.2
1927 Female, age 91, both hemispheres 235.8
2010 Male, age 76, both hemispheres 220.6
2530 Female, age 94, left hemisphere 193.2
2528 Male, age 74, both hemispheres 155.8
2246 Female, age 85, both hemispheres 133.0
Entorhinal gyrus
nTPM: 160.4
2613 Female, age 94, left hemisphere 285.7
1938 Female, age 85, left hemisphere 172.1
2764 Male, age 80, right hemisphere 146.9
1787 Male, age 76, left hemisphere 141.3
2686 Male, age 75, right hemisphere 137.6
2117 Female, age 91, right hemisphere 78.6
Hippocampus, CA1
nTPM: 279.2
2749 Male, age 80, left hemisphere 515.8
2527 Male, age 74, both hemispheres 287.6
2045 Male, age 76, both hemispheres 258.7
1873 Female, age 85, both hemispheres 218.5
2082 Female, age 91, right hemisphere 115.3
Hippocampus, CA2
nTPM: 137.0
1963 Male, age 80, left hemisphere 233.1
2249 Male, age 74, both hemispheres 186.3
1892 Male, age 76, both hemispheres 150.7
2113 Female, age 91, right hemisphere 111.8
2437 Female, age 94, left hemisphere 96.7
1940 Female, age 85, left hemisphere 43.6
Hippocampus, CA3
nTPM: 227.4
2137 Male, age 80, left hemisphere 322.3
2861 Female, age 67, both hemispheres 316.9
2620 Female, age 94, left hemisphere 277.7
2436 Male, age 74, both hemispheres 172.2
1867 Male, age 76, both hemispheres 164.0
1891 Female, age 85, both hemispheres 111.4
Parahippocampal cortex
nTPM: 143.0
2245 Female, age 91, both hemispheres 211.3
2250 Female, age 67, right hemisphere 167.2
1850 Male, age 80, both hemispheres 155.9
2018 Male, age 76, both hemispheres 150.2
1933 Female, age 85, both hemispheres 145.4
2693 Female, age 94, both hemispheres 138.7
1990 Female, age 91, right hemisphere 135.7
2622 Female, age 67, right hemisphere 125.0
2692 Male, age 74, both hemispheres 114.8
2532 Female, age 72, left hemisphere 86.1
Perirhinal gyrus
nTPM: 179.3
1847 Female, age 91, left hemisphere 311.8
2521 Female, age 94, right hemisphere 200.5
1794 Male, age 80, right hemisphere 151.7
2848 Male, age 76, right hemisphere 123.1
1841 Female, age 85, right hemisphere 109.4
Subiculum
nTPM: 117.7
1901 Male, age 80, both hemispheres 153.0
2042 Male, age 76, both hemispheres 138.0
1977 Female, age 85, both hemispheres 133.6
2729 Female, age 91, right hemisphere 125.0
2619 Male, age 74, both hemispheres 94.8
2438 Female, age 94, left hemisphere 61.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.6
Samples: 197

Max nTPM: 168.3
Min nTPM: 0.4
Std nTPM: 38.7
Median nTPM: 49.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 168.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 166.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 156.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 143.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 137.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 130.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 127.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 126.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 124.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 123.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 119.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.4
FF:10169-103B7 60 years, female 118.3
FF:10153-102I9 76 years, female 60.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 106.8
Pig sample Sample description nTPM
Subiculum
nTPM: 81.5
Samples: 4

Max nTPM: 105.5
Min nTPM: 69.7
Sample A Female 105.5
Sample B Female 72.8
Sample C Male 69.7
Sample D Male 77.9
Dorsal hippocampus
nTPM: 106.8
Samples: 4

Max nTPM: 144.8
Min nTPM: 75.8
Sample A Female 144.8
Sample B Female 115.7
Sample C Male 75.8
Sample D Male 90.8
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 55.4
Min nTPM: 41.6
Sample A Female 41.9
Sample B Female 44.0
Sample C Male 55.4
Sample D Male 41.6
Ventral hippocampus
nTPM: 84.3
Samples: 4

Max nTPM: 116.4
Min nTPM: 55.1
Sample A Female 87.4
Sample B Female 55.1
Sample C Male 78.2
Sample D Male 116.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 213.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.3
Samples: 4

Max nTPM: 119.6
Min nTPM: 60.7
Sample A Male 71.7
Sample B Male 60.7
Sample C Female 119.6
Sample D Female 89.0
Hippocampal formation
nTPM: 213.7
Samples: 4

Max nTPM: 242.6
Min nTPM: 176.7
Sample A Male 215.8
Sample B Male 219.5
Sample C Female 242.6
Sample D Female 176.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
68845239 Antisense, RP_050224_01_D05, Mouse strain C57BL/6J (56 days, male) 13.6
72077453 Antisense, RP_051017_03_A07, Mouse strain C57BL/6J (56 days, male) 11.4

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