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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
139.3
nTPM
FANTOM5:
165.9
Scaled Tags Per Million
Pig:
25.4
nTPM
Allen mouse:
3.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
139.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 123.4
2188
Female, age 91, both hemispheres
175.7
2301
Female, age 85, both hemispheres
140.0
2090
Male, age 80, both hemispheres
103.6
1984
Male, age 76, both hemispheres
74.4
Dorsal cochlear nucleus nTPM: 96.6
2187
Female, age 91, both hemispheres
125.0
2378
Male, age 80, both hemispheres
106.7
2802
Male, age 74, right hemisphere
99.8
2058
Male, age 76, both hemispheres
77.4
2370
Male, age 61, both hemispheres
74.2
Dorsal tegmental nucleus nTPM: 89.0
2083
Male, age 80, both hemispheres
105.5
2326
Male, age 74, both hemispheres
98.9
1936
Male, age 76, left hemisphere
82.4
2358
Male, age 61, both hemispheres
69.1
Dorsolateral tegmental area nTPM: 88.6
2751
Female, age 85, both hemispheres
124.9
2654
Male, age 80, both hemispheres
104.7
2360
Male, age 74, both hemispheres
82.0
2141
Male, age 76, both hemispheres
75.9
2337
Male, age 61, both hemispheres
55.4
Kolliker-Fuse nucleus nTPM: 111.6
2793
Female, age 91, left hemisphere
142.4
2163
Male, age 80, both hemispheres
121.0
2315
Male, age 76, right hemisphere
71.4
Lateral lemniscal nuclei nTPM: 119.2
2036
Male, age 80, both hemispheres
156.1
2320
Female, age 91, left hemisphere
148.9
2453
Male, age 74, right hemisphere
109.9
2746
Female, age 85, left hemisphere
92.0
2169
Male, age 76, both hemispheres
89.3
Lateral parabrachial nucleus nTPM: 109.4
2790
Male, age 61, both hemispheres
128.5
2792
Male, age 76, both hemispheres
105.4
2139
Female, age 85, right hemisphere
102.0
2013
Male, age 80, both hemispheres
101.8
Lateral vestibular nucleus nTPM: 103.5
2311
Male, age 80, both hemispheres
118.3
2184
Male, age 76, both hemispheres
88.6
Locus coeruleus nTPM: 131.8
2123
Female, age 91, both hemispheres
178.3
2014
Male, age 55, unknown
162.1
2317
Female, age 72, unknown
130.7
2162
Male, age 80, both hemispheres
123.8
2720
Male, age 74, both hemispheres
120.5
2788
Male, age 74, unknown
109.3
1980
Male, age 76, both hemispheres
97.8
Medial parabrachial nucleus nTPM: 112.1
2170
Female, age 91, both hemispheres
137.1
2463
Female, age 85, right hemisphere
129.6
2156
Male, age 61, both hemispheres
114.1
2854
Male, age 80, both hemispheres
95.6
2786
Male, age 76, both hemispheres
84.2
Medial periolivary nuclei nTPM: 100.0
2791
Male, age 74, right hemisphere
129.4
2458
Female, age 91, both hemispheres
113.1
2171
Female, age 85, both hemispheres
95.4
2063
Male, age 76, both hemispheres
85.6
2081
Male, age 80, both hemispheres
76.3
Motor facial nucleus nTPM: 115.8
2795
Female, age 91, both hemispheres
137.2
2365
Male, age 74, right hemisphere
134.3
2327
Male, age 80, both hemispheres
121.1
2126
Male, age 61, both hemispheres
115.6
2697
Female, age 85, both hemispheres
101.9
2062
Male, age 76, both hemispheres
84.8
Motor trigeminal nucleus nTPM: 106.4
2560
Male, age 74, both hemispheres
139.8
2079
Male, age 80, both hemispheres
117.8
2321
Female, age 91, both hemispheres
115.1
2335
Male, age 61, both hemispheres
85.9
2309
Male, age 76, both hemispheres
73.6
Nuclei of the trapezoid body nTPM: 135.4
2159
Male, age 61, both hemispheres
201.0
2368
Female, age 91, both hemispheres
145.1
2735
Female, age 85, both hemispheres
127.7
2166
Male, age 80, both hemispheres
117.6
1983
Male, age 76, both hemispheres
85.6
Nucleus raphe magnus nTPM: 136.2
2160
Male, age 61, both hemispheres
275.0
2455
Male, age 74, both hemispheres
135.1
2328
Male, age 80, both hemispheres
128.2
2459
Female, age 91, both hemispheres
112.5
2172
Female, age 85, both hemispheres
110.2
2051
Male, age 76, both hemispheres
56.5
Paramedian reticular nucleus nTPM: 119.5
2057
Male, age 80, both hemispheres
150.6
2313
Male, age 61, both hemispheres
141.3
2050
Female, age 85, both hemispheres
99.2
2052
Male, age 76, both hemispheres
87.1
Pedunculopontine tegmental nucleus nTPM: 89.9
1921
Female, age 85, both hemispheres
110.0
2334
Male, age 80, both hemispheres
105.0
2338
Male, age 61, both hemispheres
54.8
Pontine nuclei nTPM: 130.8
2727
Male, age 61, right hemisphere
268.4
1863
Male, age 55, unknown
141.3
2787
Female, age 85, both hemispheres
137.6
2454
Male, age 74, left hemisphere
122.4
2109
Female, age 72, unknown
110.2
2319
Female, age 91, both hemispheres
108.5
1968
Male, age 76, left hemisphere
88.5
2115
Male, age 80, left hemisphere
69.2
Pontine raphe nucleus nTPM: 110.6
2122
Female, age 85, midline
129.0
2853
Male, age 76, midline
92.3
Posteroventral cochlear nucleus nTPM: 115.4
2135
Female, age 91, both hemispheres
144.1
2341
Male, age 80, both hemispheres
135.9
2752
Female, age 85, both hemispheres
109.1
2070
Male, age 76, both hemispheres
103.0
2371
Male, age 61, both hemispheres
84.7
Principal sensory trigeminal nucleus nTPM: 139.3
2158
Male, age 61, both hemispheres
235.8
2008
Male, age 80, left hemisphere
136.5
2367
Female, age 91, left hemisphere
102.8
2324
Male, age 76, both hemispheres
82.1
Reticular pontine nucleus, caudal nTPM: 120.3
2457
Female, age 91, both hemispheres
151.9
2332
Male, age 80, right hemisphere
133.1
2559
Male, age 74, both hemispheres
102.6
2092
Male, age 76, both hemispheres
93.6
Reticular pontine nucleus, oral nTPM: 115.9
2366
Female, age 91, both hemispheres
158.6
2361
Male, age 74, both hemispheres
124.2
2012
Female, age 85, both hemispheres
122.3
1939
Male, age 80, both hemispheres
90.1
2167
Male, age 76, both hemispheres
84.0
Reticulotegmental nucleus nTPM: 97.9
2322
Female, age 91, both hemispheres
119.0
2452
Male, age 74, both hemispheres
110.8
2333
Male, age 80, both hemispheres
90.8
2325
Male, age 76, both hemispheres
70.8
Spinal trigeminal nucleus, oral nTPM: 102.4
2164
Male, age 80, both hemispheres
115.0
2737
Female, age 85, both hemispheres
114.1
1978
Male, age 76, both hemispheres
78.1
Subcoeruleus area nTPM: 101.7
2369
Female, age 85, left hemisphere
123.3
2323
Female, age 91, left hemisphere
119.7
1958
Male, age 80, both hemispheres
95.3
2089
Male, age 76, left hemisphere
88.9
2451
Male, age 74, both hemispheres
81.4
Superior olive nTPM: 118.9
2364
Male, age 74, right hemisphere
140.7
1875
Female, age 85, both hemispheres
130.6
2329
Male, age 80, right hemisphere
114.7
2561
Female, age 91, both hemispheres
106.3
2020
Male, age 76, both hemispheres
102.0
Ventral periolivary nuclei nTPM: 114.0
2165
Male, age 80, both hemispheres
129.2
2023
Male, age 76, both hemispheres
115.9
2130
Female, age 85, both hemispheres
107.3
2794
Female, age 91, left hemisphere
103.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 106.0
2456
Female, age 91, both hemispheres
132.8
2449
Male, age 74, both hemispheres
121.0
2161
Male, age 80, both hemispheres
106.6
2840
Female, age 85, both hemispheres
101.9
2359
Male, age 61, both hemispheres
91.1
1959
Male, age 76, both hemispheres
82.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
25.4
Pig sample
Sample description
nTPM
Pons nTPM: 25.5
Samples: 4
Max nTPM: 27.4
Min nTPM: 21.7
Sample A
Female
21.7
Sample B
Female
25.4
Sample C
Male
27.4
Sample D
Male
27.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
