We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
13.1
nTPM
HPA Brain:
55.2
nTPM
GTEx:
13.1
nTPM
FANTOM5:
73.9
Scaled Tags Per Million
Pig:
6.6
nTPM
Mouse:
13.2
nTPM
Allen mouse:
0.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
55.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 48.0
1830
Male, age 51, unknown
56.2
2411
Female, age 72, unknown
54.4
1833
Male, age 53, unknown
51.7
2019
Male, age 18, unknown
51.0
1870
Female, age 42, unknown
47.5
2828
Female, age 72, unknown
46.4
2219
Male, age 76, both hemispheres
46.0
1827
Male, age 72, unknown
45.6
2666
Male, age 74, left hemisphere
43.9
2586
Male, age 75, left hemisphere
37.6
Dorsal raphe nucleus nTPM: 39.2
2750
Male, age 76, both hemispheres
46.4
2016
Female, age 72, unknown
43.7
1828
Male, age 53, unknown
40.2
2047
Male, age 72, unknown
33.3
2298
Female, age 72, unknown
32.4
Inferior colliculus nTPM: 42.0
2849
Male, age 72, unknown
44.9
1848
Female, age 42, unknown
42.6
1890
Male, age 53, unknown
42.0
2097
Female, age 72, unknown
38.3
Median raphe nucleus nTPM: 42.5
2220
Male, age 76, midline
42.5
Periaquaductal grey, anterior nTPM: 42.9
2502
Female, age 75, unknown
48.7
1947
Male, age 18, unknown
43.3
1795
Male, age 51, unknown
36.7
Periaquaductal grey, dorsal nTPM: 40.4
2464
Female, age 72, unknown
48.1
2850
Male, age 76, both hemispheres
40.6
1831
Male, age 72, unknown
38.0
1840
Male, age 53, unknown
35.1
Periaquaductal grey, lateral nTPM: 41.8
2140
Male, age 76, both hemispheres
44.3
2053
Male, age 18, unknown
41.1
2272
Male, age 74, both hemispheres
40.0
Pretectal area nTPM: 43.8
2316
Male, age 76, right hemisphere
52.3
2407
Male, age 75, both hemispheres
51.9
1815
Male, age 53, unknown
49.1
2007
Male, age 72, unknown
44.0
2825
Male, age 18, unknown
43.5
1817
Female, age 42, unknown
43.3
2273
Male, age 74, both hemispheres
41.3
2667
Female, age 75, unknown
40.5
1816
Male, age 51, unknown
38.7
1944
Female, age 72, unknown
38.5
2224
Female, age 72, unknown
38.3
Red nucleus nTPM: 55.2
1865
Male, age 51, unknown
64.0
2503
Female, age 72, unknown
61.3
1904
Male, age 53, unknown
58.2
2785
Male, age 18, unknown
57.9
2725
Female, age 75, unknown
56.5
2823
Male, age 76, right hemisphere
56.0
2588
Male, age 74, left hemisphere
53.4
2769
Male, age 72, unknown
52.4
2227
Male, age 72, unknown
52.0
1954
Female, age 42, unknown
51.4
1821
Female, age 72, unknown
50.8
2584
Male, age 75, left hemisphere
48.9
Substantia nigra nTPM: 43.3
2409
Female, age 72, unknown
57.9
2583
Male, age 75, right hemisphere
46.7
2241
Male, age 72, unknown
45.3
2699
Male, age 18, unknown
44.2
2590
Female, age 75, unknown
42.2
1889
Female, age 72, unknown
42.1
1941
Male, age 53, unknown
42.0
1851
Male, age 51, unknown
41.0
2665
Male, age 74, both hemispheres
37.7
1916
Female, age 42, unknown
34.2
Superior colliculus nTPM: 45.7
1913
Female, age 42, unknown
58.0
1995
Male, age 72, unknown
56.5
1895
Male, age 76, right hemisphere
50.6
1839
Male, age 51, unknown
48.6
2587
Male, age 74, left hemisphere
45.1
2668
Female, age 75, unknown
42.1
1796
Male, age 53, unknown
40.4
2087
Female, age 72, unknown
39.3
2261
Male, age 18, unknown
39.1
2664
Male, age 75, both hemispheres
36.9
Ventral tegmental area nTPM: 42.7
2410
Female, age 72, unknown
49.5
2223
Female, age 72, unknown
44.6
2218
Male, age 76, both hemispheres
42.8
2021
Male, age 53, unknown
41.4
1942
Male, age 51, unknown
39.5
1915
Female, age 42, unknown
38.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
13.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 13.1
Samples: 139
Max nTPM: 24.2
Min nTPM: 5.8
Std nTPM: 3.5
Median nTPM: 12.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
24.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
24.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
24.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
22.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
21.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
20.8
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
20.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
19.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
19.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
19.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
19.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
18.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
18.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
18.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
18.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
18.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
18.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
17.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
17.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
17.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
17.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
16.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
16.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
16.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
15.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
15.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
15.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
15.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
15.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
15.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
15.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
14.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
14.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
14.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
14.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
14.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
14.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
14.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
14.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
14.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
14.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
14.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
14.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
14.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
13.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
13.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
13.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
13.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
13.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
13.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
13.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
13.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
13.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
13.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
13.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
13.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
13.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
13.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
13.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
13.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
13.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
13.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
12.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
12.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
12.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
12.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
12.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
12.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
12.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
12.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
12.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
12.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
12.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
12.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
12.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
11.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
11.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
11.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
11.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
11.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
11.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
11.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
11.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
11.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
11.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
11.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
11.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
11.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
11.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
11.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
11.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
11.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
11.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
11.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
11.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
11.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
11.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
11.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
11.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
10.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
10.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
10.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
10.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
10.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
10.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
10.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
10.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
10.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
10.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
10.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
10.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
10.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
10.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
10.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
9.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
9.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
9.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
9.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
9.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
9.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
9.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
9.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
9.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
9.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
9.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
9.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
8.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
8.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
8.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
8.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
8.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
8.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
8.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
8.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
7.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
7.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
7.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
6.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
5.8
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
13.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 13.2
Samples: 4
Max nTPM: 14.3
Min nTPM: 11.8
Sample A
Male
11.8
Sample B
Male
14.3
Sample C
Female
13.7
Sample D
Female
13.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.