HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:18.8 nTPM
HPA Brain:46.3 nTPM
GTEx:18.8 nTPM
FANTOM5:85.0 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:6.0 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044314
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.3
Sample id Sample description nTPM
Hippocampus
nTPM: 43.4
1911 Female, age 85, right hemisphere 48.9
2148 Female, age 91, left hemisphere 44.7
2621 Female, age 67, right hemisphere 44.7
2529 Female, age 94, left hemisphere 43.3
1898 Male, age 80, left hemisphere 39.7
1855 Male, age 76, left hemisphere 39.0
Dentate gyrus
nTPM: 43.4
2531 Female, age 67, both hemispheres 48.8
2246 Female, age 85, both hemispheres 47.0
1927 Female, age 91, both hemispheres 45.2
2010 Male, age 76, both hemispheres 41.2
2528 Male, age 74, both hemispheres 39.5
2530 Female, age 94, left hemisphere 38.7
Entorhinal gyrus
nTPM: 43.8
1938 Female, age 85, left hemisphere 48.1
2764 Male, age 80, right hemisphere 44.4
1787 Male, age 76, left hemisphere 44.2
2686 Male, age 75, right hemisphere 42.9
2613 Female, age 94, left hemisphere 42.4
2117 Female, age 91, right hemisphere 40.9
Hippocampus, CA1
nTPM: 44.0
2749 Male, age 80, left hemisphere 45.4
2082 Female, age 91, right hemisphere 44.4
1873 Female, age 85, both hemispheres 43.7
2527 Male, age 74, both hemispheres 43.6
2045 Male, age 76, both hemispheres 43.1
Hippocampus, CA2
nTPM: 41.4
2113 Female, age 91, right hemisphere 43.0
1940 Female, age 85, left hemisphere 42.9
1963 Male, age 80, left hemisphere 41.8
1892 Male, age 76, both hemispheres 40.9
2249 Male, age 74, both hemispheres 40.9
2437 Female, age 94, left hemisphere 38.7
Hippocampus, CA3
nTPM: 46.3
2137 Male, age 80, left hemisphere 51.5
1891 Female, age 85, both hemispheres 50.1
2620 Female, age 94, left hemisphere 48.5
1867 Male, age 76, both hemispheres 43.3
2436 Male, age 74, both hemispheres 42.9
2861 Female, age 67, both hemispheres 41.8
Parahippocampal cortex
nTPM: 43.8
1850 Male, age 80, both hemispheres 48.2
2532 Female, age 72, left hemisphere 47.4
2692 Male, age 74, both hemispheres 46.4
2693 Female, age 94, both hemispheres 45.2
1990 Female, age 91, right hemisphere 44.9
2018 Male, age 76, both hemispheres 42.7
1933 Female, age 85, both hemispheres 42.3
2622 Female, age 67, right hemisphere 41.8
2245 Female, age 91, both hemispheres 41.0
2250 Female, age 67, right hemisphere 37.6
Perirhinal gyrus
nTPM: 42.9
2848 Male, age 76, right hemisphere 45.3
1841 Female, age 85, right hemisphere 44.6
2521 Female, age 94, right hemisphere 43.2
1794 Male, age 80, right hemisphere 41.1
1847 Female, age 91, left hemisphere 40.2
Subiculum
nTPM: 45.1
1901 Male, age 80, both hemispheres 50.4
1977 Female, age 85, both hemispheres 48.9
2042 Male, age 76, both hemispheres 47.7
2438 Female, age 94, left hemisphere 43.9
2729 Female, age 91, right hemisphere 40.1
2619 Male, age 74, both hemispheres 40.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.8
Samples: 197

Max nTPM: 30.4
Min nTPM: 12.7
Std nTPM: 2.7
Median nTPM: 18.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 30.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 26.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.6
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 25.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 24.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 24.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 24.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 23.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.0
FF:10169-103B7 60 years, female 110.0
FF:10153-102I9 76 years, female 59.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.7
Pig sample Sample description nTPM
Subiculum
nTPM: 15.5
Samples: 4

Max nTPM: 20.9
Min nTPM: 13.1
Sample A Female 20.9
Sample B Female 13.7
Sample C Male 13.1
Sample D Male 14.4
Dorsal hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.9
Sample A Female 18.1
Sample B Female 15.0
Sample C Male 15.9
Sample D Male 13.9
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.7
Min nTPM: 13.6
Sample A Female 17.7
Sample B Female 17.4
Sample C Male 13.6
Sample D Male 13.6
Ventral hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 15.5
Min nTPM: 12.7
Sample A Female 15.3
Sample B Female 12.7
Sample C Male 14.0
Sample D Male 15.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.0
Sample A Male 6.0
Sample B Male 6.3
Sample C Female 5.7
Sample D Female 5.0
Hippocampal formation
nTPM: 6.0
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.3
Sample A Male 5.3
Sample B Male 6.5
Sample C Female 6.3
Sample D Female 6.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
69873499 Antisense, RP_050512_01_D07, Mouse strain C57BL/6J (56 days, male) 8.0

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